RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TIMM23BQ5SRD1 257 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 MRPL2Q5T653 305 aaKnown RBP15.95■□□□□ 0.14
CHD3-214ENST00000572579 ZIC4Q8N9L1 334 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 OR52E4Q8NGH9 312 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 FBXW5Q969U6 566 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 VPS33AQ96AX1 596 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 TLCD1Q96CP7 247 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 OR52B2Q96RD2 323 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 TMEM181Q9P2C4 612 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 TRAPPC4Q9Y296 219 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 NOSIPQ9Y314 301 aaKnown RBP15.95■□□□□ 0.14
CHD3-214ENST00000572579 SLC25A15Q9Y619 301 aa15.95■□□□□ 0.14
CHD3-214ENST00000572579 ALPK2Q86TB3 2170 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 OR5H1A6NKK0 313 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 FAM171A2A8MVW0 826 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 INAFM1C9JVW0 142 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 RAD51DO75771 328 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 IGHV4-39P01824 125 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 ITGA5P08648 1049 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 TFPTP0C1Z6 253 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 GKN3PP0CG01 181 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 ETFAP13804 333 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 GGT1P19440 569 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 CLK1P49759 484 aaKnown RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 SLC18A1P54219 525 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 MAGOHP61326 146 aaKnown RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 SPOCK1Q08629 439 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 PDCD4Q53EL6 469 aaKnown RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 DNM1P46Q6ZS02 220 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 VRK2Q86Y07 508 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 CMIPQ8IY22 773 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 KIRREL3Q8IZU9 778 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 CLIP4Q8N3C7 705 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 WDR31Q8NA23 367 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 OR9I1Q8NGQ6 314 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 AURKBQ96GD4 344 aaPredicted RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 USB1Q9BQ65 265 aaKnown RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 GDF2Q9UK05 429 aaPredicted RBP15.94■□□□□ 0.14
CHD3-214ENST00000572579 DSPPQ9NZW4 1301 aa15.94■□□□□ 0.14
CHD3-214ENST00000572579 CDHR4A6H8M9 788 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 KIAA1324LA8MWY0 1029 aaPredicted RBP15.93■□□□□ 0.14
CHD3-214ENST00000572579 FAAHO00519 579 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SLC22A3O75751 556 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 NR2F1P10589 423 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 PRG2P13727 222 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SLC1A3P43003 542 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 POLR2HP52434 150 aaKnown RBP15.93■□□□□ 0.14
CHD3-214ENST00000572579 FAPQ12884 760 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SLC17A1Q14916 467 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 GABRA6Q16445 453 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SLC38A5Q8WUX1 472 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 APH1AQ96BI3 265 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 MUS81Q96NY9 551 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 TRAF4Q9BUZ4 470 aaPredicted RBP15.93■□□□□ 0.14
CHD3-214ENST00000572579 NGBQ9NPG2 151 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SDR39U1Q9NRG7 319 aaPredicted RBP15.93■□□□□ 0.14
CHD3-214ENST00000572579 CISD1Q9NZ45 108 aaKnown RBP15.93■□□□□ 0.14
CHD3-214ENST00000572579 ADAM21Q9UKJ8 722 aa15.93■□□□□ 0.14
CHD3-214ENST00000572579 SONP18583 2426 aaKnown RBP15.92■□□□□ 0.14
CHD3-214ENST00000572579 CFAP73A6NFT4 308 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 TRPC5OSA6NMA1 111 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 E7EQL1 145 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 RNF223E7ERA6 249 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 RFXANKO14593 260 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 ABCD4O14678 606 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 ZNF208O43345 1280 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 DNPH1O43598 174 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 NUDT7P0C024 238 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 ACVR1BP36896 505 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 P2RY4P51582 365 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 HPCAP84074 193 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 SLC25A3Q00325 362 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 BNIP2Q12982 314 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 CLEC12BQ2HXU8 276 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 RPS26P11Q5JNZ5 115 aaPredicted RBP15.92■□□□□ 0.14
CHD3-214ENST00000572579 NXNQ6DKJ4 435 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 B3GLCTQ6Y288 498 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 ZNF836Q6ZNA1 936 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 DTX2Q86UW9 622 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 P2RY8Q86VZ1 359 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 UBE2J2Q8N2K1 259 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 TRIML2Q8N7C3 387 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 GLB1L3Q8NCI6 653 aaPredicted RBP15.92■□□□□ 0.14
CHD3-214ENST00000572579 OR52N5Q8NH56 324 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 PIGXQ8TBF5 258 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 WDR60Q8WVS4 1066 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 C1QTNF6Q9BXI9 259 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 MANSC1Q9H8J5 431 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 TMBIM4Q9HC24 238 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 SLC7A10Q9NS82 523 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 EMC3Q9P0I2 261 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 MALT1Q9UDY8 824 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 FLVCR1Q9Y5Y0 555 aa15.92■□□□□ 0.14
CHD3-214ENST00000572579 SPIN1Q9Y657 262 aaPredicted RBP15.92■□□□□ 0.14
CHD3-214ENST00000572579 FBN1P35555 2871 aaKnown RBP15.92■□□□□ 0.14
CHD3-214ENST00000572579 LIPT2A6NK58 231 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 IL6P05231 212 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 DBIP07108 87 aaKnown RBP15.91■□□□□ 0.14
CHD3-214ENST00000572579 ZCCHC18P0CG32 403 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 IDO1P14902 403 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms