RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 DUSP2Q05923 314 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SF3A3Q12874 501 aaKnown RBP eCLIP5.98□□□□□ -1.45
CHD3-213ENST00000571249 SLAMF1Q13291 335 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ZNF628Q5EBL2 1059 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SH2D4BQ5SQS7 431 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 C18orf63Q68DL7 685 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 C16orf54Q6UWD8 224 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 MAVSQ7Z434 540 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SPATA19Q7Z5L4 167 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ISCA2Q86U28 154 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 P2RY8Q86VZ1 359 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SLC22A9Q8IVM8 553 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 OR8H2Q8N162 312 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ZCCHC24Q8N2G6 241 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 OR52N5Q8NH56 324 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ABHD3Q8WU67 409 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ANKRD49Q8WVL7 239 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 FBXL8Q96CD0 374 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 KLHL29Q96CT2 875 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 THOC1Q96FV9 657 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 PDLIM5Q96HC4 596 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 COL21A1Q96P44 957 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 KCNC2Q96PR1 638 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 TBCDQ9BTW9 1192 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CCDC28BQ9BUN5 200 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CCDC106Q9BWC9 280 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 C1QTNF3Q9BXJ4 246 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ITPAQ9BY32 194 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 DERL2Q9GZP9 239 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CCDC68Q9H2F9 335 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CXorf21Q9HAI6 301 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 ZBTB26Q9HCK0 441 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 PNPOQ9NVS9 261 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 MED11Q9P086 117 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 CPSF2Q9P2I0 782 aaKnown RBP5.98□□□□□ -1.45
CHD3-213ENST00000571249 OPN4Q9UHM6 478 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 PRSS50Q9UI38 385 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 TMCO1Q9UM00 188 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 SLC22A14Q9Y267 594 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 KCNE2Q9Y6J6 123 aa5.98□□□□□ -1.45
CHD3-213ENST00000571249 A0A0G2JMP0 313 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 A0A0X1KG70 313 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 A0A1W2PRQ8 180 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 A0A1W2PS29 197 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 CLPSL1A2RUU4 121 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 FAM181BA6NEQ2 426 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 GLOD5A6NK44 160 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ATP6V1G2-DDX39BF2Z307 99 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 H0YHG0 523 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 M0R082 166 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 HDAC3O15379 428 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 SH3BGRLO75368 114 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 EEDO75530 441 aaKnown RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 REM1O75628 298 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 PGM3O95394 542 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 HSPA4LO95757 839 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 FSHBP01225 129 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 TFP02787 698 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 AMY2AP04746 511 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 CSF1P09603 554 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 CLEC2LP0C7M8 214 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 SLC35E2P0CK97 266 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 CD1DP15813 335 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 AMY2BP19961 511 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 IMPDH1P20839 514 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 HIST1H1TP22492 207 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 IGHV1-2P23083 117 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 GSTM2P28161 218 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 PRDX6P30041 224 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 GALNSP34059 522 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 SERPINF1P36955 418 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 KHKP50053 298 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 RPL14P50914 215 aaKnown RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 IDH3GP51553 393 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 GAS1P54826 345 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 RAG2P55895 527 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ATP6V0D1P61421 351 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 AP5B1Q2VPB7 878 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ARL13AQ5H913 290 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 KLC3Q6P597 504 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 C16orf87Q6PH81 154 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 Q6ZT83 130 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ZNF781Q8N8C0 355 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 FADS6Q8N9I5 356 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 OR2M3Q8NG83 312 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 OR4M2Q8NGB6 313 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ZNF417Q8TAU3 575 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 FAM110BQ8TC76 370 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 NEU4Q8WWR8 484 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 TMBIM1Q969X1 311 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 UTP4Q969X6 686 aaKnown RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 MAELQ96JY0 434 aaKnown RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 ADGRG7Q96K78 797 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 RAB3IPQ96QF0 476 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 ZNF587Q96SQ5 575 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 ATOH8Q96SQ7 321 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 ADOQ96SZ5 270 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 NDNQ99608 321 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 EBF4Q9BQW3 602 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms