RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CIB1Q99828 191 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 RBM4BQ9BQ04 359 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 WFDC6Q9BQY6 131 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM43Q9BTV4 400 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 RBM4Q9BWF3 364 aaKnown RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TAPBPLQ9BX59 468 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OSBPL10Q9BXB5 764 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC19A3Q9BZV2 496 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR2B2Q9GZK3 357 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC25A18Q9H1K4 315 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC6A15Q9H2J7 730 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 RASSF4Q9H2L5 321 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM185BQ9H7F4 350 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PROK2Q9HC23 129 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 C8orf4Q9NR00 106 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 PDP1Q9P0J1 537 aaPredicted RBP5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 OSGIN1Q9UJX0 560 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 CACNA1AO00555 2505 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 DCHS1Q96JQ0 3298 aa5.96□□□□□ -1.46
CTDNEP1-204ENST00000570484 CEP295Q9C0D2 2601 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 WDFY3Q8IZQ1 3526 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 AHCTF1Q8WYP5 2266 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 TRAV36DV7A0A075B6V5 113 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A087WUJ7 227 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 TRGV5A0A0B4J1U4 118 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 TRBV4-1A0A0J9YWV2 114 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM72A0PK05 275 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SH3PXD2BA1X283 911 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR2M5A3KFT3 312 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ARRDC5A6NEK1 342 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 FAM181BA6NEQ2 426 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ENO4A6NNW6 628 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 A8MVM7 634 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SHISA8B8ZZ34 492 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADAM10O14672 748 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 EI24O14681 340 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 FFAR1O14842 300 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF208O43345 1280 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PIP5K1CO60331 668 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SEMA7AO75326 666 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 GLSO94925 669 aaPredicted RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRSS23O95084 383 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADAP00813 363 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RFPL3SP0C7P2 107 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 IFI30P13284 250 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ANXA8P13928 327 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 GSTM3P21266 225 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 IGFBP5P24593 272 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 MST1P26927 711 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PEX2P28328 305 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SFTPDP35247 375 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 IDUAP35475 653 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 GPR4P46093 362 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 IST1P53990 364 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RAD23AP54725 363 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 CSNK2A1P68400 391 aaPredicted RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PPP1R8Q12972 351 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC10A1Q14973 349 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 LRRC36Q1X8D7 754 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 HYAL4Q2M3T9 481 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 LINC00303Q3SY05 128 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NADK2Q4G0N4 442 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SYT14P1Q58G82 188 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC25A53Q5H9E4 307 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 C1orf140Q5VVS0 124 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 HMBOX1Q6NT76 420 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PPP4R4Q6NUP7 873 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPUSD3Q6P087 351 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 PODNL1Q6PEZ8 512 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZBTB49Q6ZSB9 765 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 CHMP1BQ7LBR1 199 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NANOGNBQ7Z5D8 188 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NKAIN4Q8IVV8 208 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NRMQ8IXM6 262 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 UBQLNLQ8IYU4 475 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RNF113BQ8IZP6 322 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 LILRA2Q8N149 483 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RBMXL3Q8N7X1 1067 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 AQP11Q8NBQ7 271 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR9Q2Q8NGE9 314 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR5M1Q8NGP8 315 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 FANK1Q8TC84 345 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC7A13Q8TCU3 470 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 SGTBQ96EQ0 304 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NRBF2Q96F24 287 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 KLHL15Q96M94 604 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR5B2Q96R09 309 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 RSPO3Q9BXY4 272 aaPredicted RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 UBQLN3Q9H347 655 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 KRT84Q9NSB2 600 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 MAN2C1Q9NTJ4 1040 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 VNN3Q9NY84 501 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 MGAT4BQ9UQ53 548 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 MRPS18CQ9Y3D5 142 aaKnown RBP5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 NCOR2Q9Y618 2525 aa5.95□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A087WUU8 490 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 HTR3EA5X5Y0 456 aa5.94□□□□□ -1.46
CTDNEP1-204ENST00000570484 EFCAB9A8MZ26 197 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms