RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MOAP1Q96BY2 351 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 SLC38A2Q96QD8 506 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 TNFRSF12AQ9NP84 129 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 ATP6V1HQ9UI12 483 aa10.84□□□□□ -0.67
SNX29-207ENST00000568949 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 EIF1BO60739 113 aaKnown RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 AK1P00568 194 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 UBTFL6P0CB48 400 aaPredicted RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 MYL2P10916 166 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 HPCAL1P37235 193 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 OR2B6P58173 313 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 SLC17A1Q14916 467 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 C3orf36Q3SXR2 165 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 SPDYE7PQ495Y7 208 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 RFTN2Q52LD8 501 aaPredicted RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 CFAP157Q5JU67 520 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 ZYG11AQ6WRX3 759 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 USP43Q70EL4 1123 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 EIF3MQ7L2H7 374 aaKnown RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 GRINAQ7Z429 371 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 GLCCI1Q86VQ1 547 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 NATD1Q8N6N6 113 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 POMGNT2Q8NAT1 580 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 OR4F15Q8NGB8 312 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 OR2T11Q8NH01 316 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 SFXN5Q8TD22 340 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 ACMSDQ8TDX5 336 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 WDR60Q8WVS4 1066 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 OR7D2Q96RA2 312 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 DOK1Q99704 481 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 NAA11Q9BSU3 229 aaPredicted RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 RBM4Q9BWF3 364 aaKnown RBP10.83□□□□□ -0.68
SNX29-207ENST00000568949 CTPS2Q9NRF8 586 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 TMEM181Q9P2C4 612 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 DCDC2Q9UHG0 476 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 KCNE5Q9UJ90 142 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 PTGDR2Q9Y5Y4 395 aa10.83□□□□□ -0.68
SNX29-207ENST00000568949 EXOC1LA0A1B0GW35 172 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 DUXAA6NLW8 204 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 VSTM5A8MXK1 200 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 G3V2L1 256 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 KLF11O14901 512 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 ZNF500O60304 480 aaPredicted RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 STX11O75558 287 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 BCKDHAP12694 445 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 IFNGR1P15260 489 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 SLC1A3P43003 542 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 DNAJB13P59910 316 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 RPL38P63173 70 aaKnown RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 SLC35A1P78382 337 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 NAAAQ02083 359 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 GPR68Q15743 365 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 LSM12Q3MHD2 195 aaKnown RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 HIKESHIQ53FT3 197 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 CLEC6AQ6EIG7 209 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 ABHD12BQ7Z5M8 362 aaPredicted RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 FAM71CQ8NEG0 241 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 ZNF563Q8TA94 476 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 UBASH3BQ8TF42 649 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 OIT3Q8WWZ8 545 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 TMEM45BQ96B21 275 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 OR11A1Q9GZK7 315 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 ZNF442Q9H7R0 627 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 MOV10Q9HCE1 1003 aaKnown RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 TMEM45AQ9NWC5 275 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 CRNNQ9UBG3 495 aaPredicted RBP10.82□□□□□ -0.68
SNX29-207ENST00000568949 PCDHB10Q9UN67 800 aa10.82□□□□□ -0.68
SNX29-207ENST00000568949 ARPC4-TTLL3A0A0A6YYG9 625 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 hCG_2039718K7EN88 272 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 LSM1O15116 133 aaKnown RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 SCAMP2O15127 329 aaKnown RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 FCMRO60667 390 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 UGT2B17O75795 530 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 LAMP1P11279 417 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 CDH2P19022 906 aaPredicted RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 GCAP28676 217 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 PGM1P36871 562 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 LIMS1P48059 325 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 ARFIP2P53365 341 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 HILS1P60008 231 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 TRIP10Q15642 601 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 AP1ARQ63HQ0 302 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 ANKRD16Q6P6B7 361 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 VHLLQ6RSH7 139 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 TRMT10CQ7L0Y3 403 aaKnown RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 PEG10Q86TG7 708 aaKnown RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 ADGRG3Q86Y34 549 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 FAM169BQ8N8A8 192 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 OR7A2PQ8NGA2 310 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 OR5D16Q8NGK9 328 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 PMM1Q92871 262 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 DNAJA3Q96EY1 480 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 ZNF317Q96PQ6 595 aaPredicted RBP10.81□□□□□ -0.68
SNX29-207ENST00000568949 JMJD8Q96S16 334 aa10.81□□□□□ -0.68
SNX29-207ENST00000568949 TUBB1Q9H4B7 451 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms