RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	TMEM211	Q6ICI0	200 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PPP4R4	Q6NUP7	873 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TMPPE	Q6ZT21	453 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	P4HA3	Q7Z4N8	544 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	GGN	Q86UU5	652 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	DOLPP1	Q86YN1	238 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OFCC1	Q8IZS5	231 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PIK3C3	Q8NEB9	887 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OR10D3	Q8NH80	312 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	PRR7	Q8TB68	274 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	OSTF1	Q92882	214 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CPNE4	Q96A23	557 aa	Predicted RBP	13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TRIB1	Q96RU8	372 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	SLC19A3	Q9BZV2	496 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	KLHL4	Q9C0H6	718 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	CALHM2	Q9HA72	323 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	A4GNT	Q9UNA3	340 aa		13.4	□□□□□ -0.26
KLHDC4-223	ENST00000568499	TRAV36DV7	A0A075B6V5	113 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499		A0A0J9YW62	118 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HTR3E	A5X5Y0	456 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499		J3KTA2	159 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNHIT1	O43257	154 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	DNPH1	O43598	174 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	EIF1B	O60739	113 aa	Known RBP	13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	KRT36	O76013	467 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	PMS2P2	O95744	297 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FCGR2A	P12318	317 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR2B6	P58173	313 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RAC3	P60763	192 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SLC35A1	P78382	337 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	VLDLR	P98155	873 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MYBPH	Q13203	477 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MFSD13A	Q14CX5	517 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C3AR1	Q16581	482 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C1orf140	Q5VVS0	124 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	GTF2IRD2B	Q6EKJ0	949 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MTFR2	Q6P444	385 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	B3GNT6	Q6ZMB0	384 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	GTF2IRD2	Q86UP8	949 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ADGRG5	Q8IZF4	528 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C10orf53	Q8N6V4	93 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CANT1	Q8WVQ1	401 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TMEM239	Q8WW34	195 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	UTP4	Q969X6	686 aa	Known RBP	13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TUBA1C	Q9BQE3	449 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NAA11	Q9BSU3	229 aa	Predicted RBP	13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CHID1	Q9BWS9	393 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR11A1	Q9GZK7	315 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SH3BGRL2	Q9UJC5	107 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TINAG	Q9UJW2	476 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MED31	Q9Y3C7	131 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF175	Q9Y473	711 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	HEATR5A	Q86XA9	2040 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499	NCKAP5	O14513	1909 aa		13.39	□□□□□ -0.27
KLHDC4-223	ENST00000568499		A0A1W2PNR3	127 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499		A0A1W2PRQ8	180 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CD8B2	A6NJW9	211 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SLC22A20	A6NK97	555 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CLCA1	A8K7I4	914 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499		E9PLN8	166 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	GNGT2	O14610	69 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CXCL13	O43927	109 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	GADD45G	O95257	159 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	WISP1	O95388	367 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ENPP1	P22413	925 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MAGEA2	P43356	314 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	DIO1	P49895	249 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SPIB	Q01892	262 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FOXD4	Q12950	439 aa	Predicted RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	DGCR6	Q14129	220 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CTU2	Q2VPK5	515 aa	Known RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ACSF3	Q4G176	576 aa	Predicted RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	EMC4	Q5J8M3	183 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	FGD3	Q5JSP0	725 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	LINC00114	Q6XXX2	140 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF730	Q6ZMV8	503 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CDK20	Q8IZL9	346 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RNF113B	Q8IZP6	322 aa	Known RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	OR6S1	Q8NH40	331 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	MFSD8	Q8NHS3	518 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	WNT2B	Q93097	391 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	UCN2	Q96RP3	112 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TM9SF2	Q99805	663 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	VKORC1	Q9BQB6	163 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	RHCG	Q9UBD6	479 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TMCC3	Q9ULS5	477 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	TESMIN	Q9Y4I5	508 aa		13.38	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SVIL	O95425	2214 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	ZNF407	Q9C0G0	2248 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499		H0YC42	278 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CCL21	O00585	134 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SEMA7A	O75326	666 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	DIRAS1	O95057	198 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	CST1	P01037	141 aa		13.37	□□□□□ -0.27
KLHDC4-223	ENST00000568499	SHC1	P29353	583 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms