RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MAPK14Q16539 360 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 EIPR1Q53HC9 387 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 ARHGAP40Q5TG30 622 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 RHOUQ7L0Q8 258 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 GPAT4Q86UL3 456 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 BPIFCQ8NFQ6 507 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 STEAP2Q8NFT2 490 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 TTLQ8NG68 377 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 OR51D1Q8NGF3 324 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 PTCHD1Q96NR3 888 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 CNTNAP3BQ96NU0 1288 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 CBLCQ9ULV8 474 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 NPFFR2Q9Y5X5 522 aa10.12□□□□□ -0.79
PALB2-206ENST00000568219 COL5A3P25940 1745 aaPredicted RBP10.12□□□□□ -0.79
PALB2-206ENST00000568219 GXYLT2A0PJZ3 443 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 NAP1L6A6NFF2 107 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 K7ESM1 405 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 NMBP08949 121 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 GIPP09681 153 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 SULT1A3P0DMM9 295 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 SULT1A4P0DMN0 295 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 CDK2P24941 298 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 AGTR1P30556 359 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 RORAP35398 523 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 DNASE1L1P49184 302 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ACTC1P68032 377 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ACTA1P68133 377 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 EIF2B1Q14232 305 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 ETFDHQ16134 617 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 ZNF770Q6IQ21 691 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 TMEFF1Q8IYR6 380 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ACOT4Q8N9L9 421 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ZNF511Q8NB15 262 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 HERVK_113Q902F9 699 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 LMLNQ96KR4 655 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 MKKSQ9NPJ1 570 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 LAMP5Q9UJQ1 280 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 LIPT1Q9Y234 373 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ATG4BQ9Y4P1 393 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 OR52A4PA6NMU1 304 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 HLA-AP01891 365 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 TRHRP34981 398 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 GRK6P43250 576 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 PGDP52209 483 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 KCNAB1Q14722 419 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 C19orf48Q6RUI8 117 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 SEZ6L2Q6UXD5 910 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 DPPA4Q7L190 304 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 HCAR1Q9BXC0 346 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 POTEKPQ9BYX7 375 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 TSPAN10Q9H1Z9 355 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 KLHL42Q9P2K6 505 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 KIAA0355O15063 1070 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 FBXO24O75426 580 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 CD2P06729 351 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 DBIP07108 87 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 SNRNP70P08621 437 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 NAGAP17050 411 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 MAOBP27338 520 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 LTBQ06643 244 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 PEA15Q15121 130 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 RBMS2Q15434 407 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 ALG10BQ5I7T1 473 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 UBE2NLQ5JXB2 153 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ZNF620Q6ZNG0 422 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 USP50Q70EL3 339 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 ZNF761Q86XN6 746 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 SLC35F2Q8IXU6 374 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 C2orf15Q8WU43 125 aaKnown RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 LCN9Q8WX39 176 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 DCUN1D4Q92564 292 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 SLC25A36Q96CQ1 311 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 ZNF558Q96NG5 402 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
PALB2-206ENST00000568219 TM7SF3Q9NS93 570 aa10.11□□□□□ -0.79
PALB2-206ENST00000568219 SFTPBP07988 381 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 UBBP0CG47 229 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 UBCP0CG48 685 aaKnown RBP10.1□□□□□ -0.79
PALB2-206ENST00000568219 KCNJ3P48549 501 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 GLB1L2Q8IW92 636 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 BVESQ8NE79 360 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 LILRB1Q8NHL6 650 aaPredicted RBP10.1□□□□□ -0.79
PALB2-206ENST00000568219 ZNF563Q8TA94 476 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 MAFIPQ8WZ33 124 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 TOE1Q96GM8 510 aaKnown RBP10.1□□□□□ -0.79
PALB2-206ENST00000568219 NMNAT3Q96T66 252 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 PFDN5Q99471 154 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 MTHFD2LQ9H903 347 aaPredicted RBP10.1□□□□□ -0.79
PALB2-206ENST00000568219 NRIP3Q9NQ35 241 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 SLC35A3Q9Y2D2 325 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 C7orf66A4D0T2 115 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 TMEM200CA6NKL6 621 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 IDSB3KWA1 339 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 CDC42EP2O14613 210 aa10.1□□□□□ -0.79
PALB2-206ENST00000568219 SUSD5O60279 629 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms