RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 DUSP7Q16829 419 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 OR2T5Q6IEZ7 315 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 MEX3BQ6ZN04 569 aaKnown RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 P4HA3Q7Z4N8 544 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 GDF7Q7Z4P5 450 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 VTCN1Q7Z7D3 282 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 GRAMD2AQ8IUY3 354 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 UBQLNLQ8IYU4 475 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 SMYD1Q8NB12 490 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 TOR1AIP2Q8NFQ8 470 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 OR2T29Q8NH02 315 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 NRBF2Q96F24 287 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 C7orf34Q96L11 122 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 POLR2J2Q9GZM3 115 aaKnown RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 POLR2J3Q9H1A7 115 aaKnown RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 PAQR5Q9NXK6 330 aaPredicted RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 FOXD3Q9UJU5 478 aaPredicted RBP12.1□□□□□ -0.47
CLK3-218ENST00000566926 PRDM4Q9UKN5 801 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 ENPP4Q9Y6X5 453 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 MAST4O15021 2626 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 NPIPA5A0A0B4J1W7 369 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 SERINC4A6NH21 518 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 TMEM229AB2RXF0 380 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 NPIPA7E9PJI5 369 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 C19orf84I3L1E1 186 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ZNF264O43296 627 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 FCMRO60667 390 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 RCBTB2O95199 551 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 CRHP06850 196 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 NPIPA8P0DM63 369 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 TMIGD3P0DMS9 266 aaPredicted RBP12.09□□□□□ -0.47
CLK3-218ENST00000566926 UBL4AP11441 157 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 NID1P14543 1247 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 BMP5P22003 454 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ADH6P28332 368 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 HSPA13P48723 471 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ZNF117Q03924 483 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 TFF3Q07654 80 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 CD226Q15762 336 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 TMEM44Q2T9K0 475 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 PLPPR5Q32ZL2 321 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 PDSS1Q5T2R2 415 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 PDZK1Q5T2W1 519 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ARSKQ6UWY0 536 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ZDHHC13Q8IUH4 622 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 LIX1LQ8IVB5 337 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ZNF300Q96RE9 604 aaPredicted RBP12.09□□□□□ -0.47
CLK3-218ENST00000566926 PIP5K1AQ99755 562 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 REEP1Q9H902 201 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 MED17Q9NVC6 651 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 NDUFAF4Q9P032 175 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 CLCF1Q9UBD9 225 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 MKLN1Q9UL63 735 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 ZNF443Q9Y2A4 671 aaPredicted RBP12.09□□□□□ -0.47
CLK3-218ENST00000566926 CARD8Q9Y2G2 431 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
CLK3-218ENST00000566926 CYSRT1A8MQ03 144 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SEC14L5O43304 696 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 E2F6O75461 281 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 CSTAP01040 98 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 PEX2P28328 305 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
CLK3-218ENST00000566926 ASCL1P50553 236 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 ZNF136P52737 540 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 RAC1P63000 192 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 VLDLRP98155 873 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 CBFBQ13951 182 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SGCBQ16585 318 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 CARM1Q86X55 608 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 MCEMP1Q8IX19 187 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 C9orf106Q8NAJ2 232 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 ACBD4Q8NC06 268 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 NAXEQ8NCW5 288 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 GPR32P1Q8NGA4 272 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 OR5M1Q8NGP8 315 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 OR5W2Q8NH69 310 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SMPDL3BQ92485 455 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 EPYCQ99645 322 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SFXN3Q9BWM7 321 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 LAT2Q9GZY6 243 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.08□□□□□ -0.48
CLK3-218ENST00000566926 ICAM5Q9UMF0 924 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SLC35A3Q9Y2D2 325 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 ZNF175Q9Y473 711 aa12.08□□□□□ -0.48
CLK3-218ENST00000566926 SLC22A20A6NK97 555 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 GJE1A6NN92 205 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 KDM4EB2RXH2 506 aaPredicted RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 G3V2T6 193 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 hCG_2039718K7EN88 272 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 FMO6PO60774 539 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 UGT2B17O75795 530 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 HPRP00739 348 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 LINGO3P0C6S8 592 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 FCGR2AP12318 317 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ZNF23P17027 643 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms