RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 TMEM72A0PK05 275 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
IFT140-208ENST00000566818 HNRNPCL2B2RXH8 293 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 HNRNPCL3B7ZW38 293 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 HNRNPCL1O60812 293 aaKnown RBP16.62■□□□□ 0.25
IFT140-208ENST00000566818 TMCC2O75069 709 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 LYZL6O75951 148 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 HNRNPCL4P0DMR1 293 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 IDH3AP50213 366 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 FADDQ13158 208 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 TAB1Q15750 504 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 MAPK11Q15759 364 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 PRAMEF8Q5VWM4 474 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 PRAMEF7Q5VXH5 474 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 SLC2A7Q6PXP3 512 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 HDXQ7Z353 690 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 VRK2Q86Y07 508 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 UBE2J2Q8N2K1 259 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 TMEM171Q8WVE6 324 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 APH1AQ96BI3 265 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 DNAJA3Q96EY1 480 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 TMEM204Q9BSN7 226 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 PAIP1Q9H074 479 aaKnown RBP16.62■□□□□ 0.25
IFT140-208ENST00000566818 IFT52Q9Y366 437 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 RNF115Q9Y4L5 304 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 PCDHB14Q9Y5E9 798 aa16.62■□□□□ 0.25
IFT140-208ENST00000566818 ZNF469Q96JG9 3925 aaPredicted RBP16.62■□□□□ 0.25
IFT140-208ENST00000566818 RAI1Q7Z5J4 1906 aaPredicted RBP16.62■□□□□ 0.25
IFT140-208ENST00000566818 ZNF716A6NP11 495 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 C5orf58C9J3I9 102 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 CLIC1O00299 241 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 NR5A2O00482 541 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 HS3ST1O14792 307 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 CD3EP07766 207 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 NCF2P19878 526 aaPredicted RBP16.61■□□□□ 0.25
IFT140-208ENST00000566818 COX5AP20674 150 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 PPIBP23284 216 aaKnown RBP16.61■□□□□ 0.25
IFT140-208ENST00000566818 CXCR1P25024 350 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 SLC16A1P53985 500 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 AQP5P55064 265 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 RGNQ15493 299 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 STK11Q15831 433 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 RPS26P11Q5JNZ5 115 aaPredicted RBP16.61■□□□□ 0.25
IFT140-208ENST00000566818 WBP2NLQ6ICG8 309 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.61■□□□□ 0.25
IFT140-208ENST00000566818 CADM2Q8N3J6 435 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 BBS10Q8TAM1 723 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 MUCL1Q96DR8 90 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 SPATA9Q9BWV2 254 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 CXorf56Q9H5V9 222 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 A4GALTQ9NPC4 353 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 INTS9Q9NV88 658 aaKnown RBP16.61■□□□□ 0.25
IFT140-208ENST00000566818 RLIMQ9NVW2 624 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 TMEM45AQ9NWC5 275 aa16.61■□□□□ 0.25
IFT140-208ENST00000566818 VPS13CQ709C8 3753 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 CLOCKO15516 846 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 MRPL33O75394 65 aaKnown RBP16.6■□□□□ 0.25
IFT140-208ENST00000566818 GGT1P19440 569 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 IDUAP35475 653 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 PPA1Q15181 289 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 FBXW9Q5XUX1 488 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 P2RY8Q86VZ1 359 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 KRTAP1-3Q8IUG1 177 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 ZNF611Q8N823 705 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 AKAP1Q92667 903 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT140-208ENST00000566818 SPDL1Q96EA4 605 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 PERPQ96FX8 193 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 ADAM19Q9H013 955 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 VIPAS39Q9H9C1 493 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 CCDC167Q9P0B6 97 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 SLC9A8Q9Y2E8 581 aa16.6■□□□□ 0.25
IFT140-208ENST00000566818 PLAUP00749 431 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 GPIP06744 558 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 GKN3PP0CG01 181 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 BMP2P12643 396 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 IGHV1-2P23083 117 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 ATP4BP51164 291 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 SQLEQ14534 574 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 ZNF311Q5JNZ3 666 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 TIMM23BQ5SRD1 257 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 NCMAPQ5T1S8 102 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 LRIF1Q5T3J3 769 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 BLOC1S3Q6QNY0 202 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 PAQR6Q6TCH4 344 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 PRSS57Q6UWY2 283 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 CASP12Q6UXS9 341 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 BIVMQ86UB2 503 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 CCDC103Q8IW40 242 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 C18orf12Q96KH6 178 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 GSX2Q9BZM3 304 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 BCL2L10Q9HD36 194 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 PARPBPQ9NWS1 579 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 CORO2BQ9UQ03 480 aa16.59■□□□□ 0.25
IFT140-208ENST00000566818 FREM1Q5H8C1 2179 aa16.58■□□□□ 0.25
IFT140-208ENST00000566818 SETD2Q9BYW2 2564 aaPredicted RBP16.58■□□□□ 0.25
IFT140-208ENST00000566818 IMPDH2P12268 514 aa16.58■□□□□ 0.24
IFT140-208ENST00000566818 HOXB9P17482 250 aaPredicted RBP16.58■□□□□ 0.24
IFT140-208ENST00000566818 EDNRAP25101 427 aa16.58■□□□□ 0.24
IFT140-208ENST00000566818 ACAA2P42765 397 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms