RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 OSGIN1Q9UJX0 560 aa17.83■□□□□ 0.44
CLN6-207ENST00000566347 TMED7Q9Y3B3 224 aa17.83■□□□□ 0.44
CLN6-207ENST00000566347 CADP27708 2225 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 TRIM64A6NGJ6 449 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 TRIM64BA6NI03 449 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 EIF1BO60739 113 aaKnown RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 PGM3O95394 542 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 ANP32DO95626 131 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 ZCCHC18P0CG32 403 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 CCNA2P20248 432 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 SLC35A1P78382 337 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 EPS8Q12929 822 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 ZNF672Q499Z4 452 aaPredicted RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 SLC9B1Q4ZJI4 515 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 MRPL2Q5T653 305 aaKnown RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 DNAJC14Q6Y2X3 702 aaPredicted RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 UBE2J2Q8N2K1 259 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 ZNF433Q8N7K0 673 aaPredicted RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 TLCD1Q96CP7 247 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 TMBIM4Q9HC24 238 aa17.82■□□□□ 0.44
CLN6-207ENST00000566347 SDR39U1Q9NRG7 319 aaPredicted RBP17.82■□□□□ 0.44
CLN6-207ENST00000566347 TLN2Q9Y4G6 2542 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 DPRXA6NFQ7 191 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 OR5H1A6NKK0 313 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 KLF11O14901 512 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 UBDO15205 165 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 MRPL33O75394 65 aaKnown RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 LY6G6DO95868 133 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 TACR3P29371 465 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 CRISP3P54108 245 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 H3F3AP84243 136 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 ZSWIM7Q19AV6 140 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 LIN52Q52LA3 116 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 SMAP2Q8WU79 429 aaPredicted RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 DNAJA3Q96EY1 480 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 TRMT61AQ96FX7 289 aaKnown RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 ITCHQ96J02 903 aa17.81■□□□□ 0.44
CLN6-207ENST00000566347 NAA11Q9BSU3 229 aaPredicted RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 THUMPD1Q9NXG2 353 aaKnown RBP17.81■□□□□ 0.44
CLN6-207ENST00000566347 ZANQ9Y493 2812 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 ABCA2Q9BZC7 2435 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 DSPPQ9NZW4 1301 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 A0A1W2PP18 115 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 TMEM72A0PK05 275 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 DANCRP0C864 163 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 CRATP43155 626 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 MVDP53602 400 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 DSTNP60981 165 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 ETFDHQ16134 617 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 ATG4DQ86TL0 474 aaPredicted RBP17.8■□□□□ 0.44
CLN6-207ENST00000566347 CCDC103Q8IW40 242 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 KBTBD8Q8NFY9 601 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 OR52P1PQ8NH57 321 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 TRIM2Q9C040 744 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 TPT1P8Q9HAU6 139 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 SLC6A13Q9NSD5 602 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 PARPBPQ9NWS1 579 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 ASB6Q9NWX5 421 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 TAS2R16Q9NYV7 291 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 MALT1Q9UDY8 824 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 SLC9A8Q9Y2E8 581 aa17.8■□□□□ 0.44
CLN6-207ENST00000566347 CIB4A0PJX0 185 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 CDHR4A6H8M9 788 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 TMEM247A6NEH6 219 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 OVOL3O00110 214 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 IGHV3-9P01782 118 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 SOD3P08294 240 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 ETFAP13804 333 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 POLR2JP52435 117 aaKnown RBP17.79■□□□□ 0.44
CLN6-207ENST00000566347 MAPK11Q15759 364 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 BEND6Q5SZJ8 279 aaPredicted RBP17.79■□□□□ 0.44
CLN6-207ENST00000566347 OR7E24Q6IFN5 339 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 MAVSQ7Z434 540 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 MIER2Q8N344 545 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 NEUROG1Q92886 237 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 GTPBP3Q969Y2 492 aaKnown RBP17.79■□□□□ 0.44
CLN6-207ENST00000566347 RADILQ96JH8 1075 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 OR52B2Q96RD2 323 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 ADAM19Q9H013 955 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 CACYBPQ9HB71 228 aaKnown RBP17.79■□□□□ 0.44
CLN6-207ENST00000566347 FAIMQ9NVQ4 179 aa17.79■□□□□ 0.44
CLN6-207ENST00000566347 CSPG4Q6UVK1 2322 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 FN1P02751 2386 aaKnown RBP17.78■□□□□ 0.44
CLN6-207ENST00000566347 CCT8L1PA6NM43 557 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 RAMP1O60894 148 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 RAD51DO75771 328 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 BCHEP06276 602 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 TFPTP0C1Z6 253 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 IMPDH2P12268 514 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 CXCR1P25024 350 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 COPZ1P61923 177 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 LARS2Q15031 903 aaKnown RBP17.78■□□□□ 0.44
CLN6-207ENST00000566347 C6orf10Q5SRN2 563 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 RNF220Q5VTB9 566 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 PAQR6Q6TCH4 344 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 CASP12Q6UXS9 341 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 ZNF836Q6ZNA1 936 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 VRK2Q86Y07 508 aa17.78■□□□□ 0.44
CLN6-207ENST00000566347 SLC38A5Q8WUX1 472 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms