RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 INHBBP09529 407 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GKN3PP0CG01 181 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 PRG2P13727 222 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 CHMP24386 653 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GDF1P27539 372 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 EIF1P41567 113 aaKnown RBP11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TPD52P55327 224 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GFRA1P56159 465 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 QPRTQ15274 297 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TOMM34Q15785 309 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-206ENST00000565990 PLPPR5Q32ZL2 321 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 COLEC12Q5KU26 742 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GTF2IRD2BQ6EKJ0 949 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TBPL2Q6SJ96 375 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GTF2IRD2Q86UP8 949 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 ANKRD13BQ86YJ7 626 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 MINDY2Q8NBR6 621 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 OR4D11Q8NGI4 311 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 POC1BQ8TC44 478 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 ST8SIA1Q92185 356 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 MUL1Q969V5 352 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 GPR137Q96N19 417 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 DEFB127Q9H1M4 99 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TOR3AQ9H497 397 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TAS2R10Q9NYW0 307 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 NPIPA1Q9UND3 350 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
SF3B3-206ENST00000565990 LOC100130705A0A1B0GUX0 176 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 AP3D1O14617 1153 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 EFNA2O43921 213 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PFDN1O60925 122 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 SEMA7AO75326 666 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 CYP7B1O75881 506 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 C1QL1O75973 258 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PRKD3O94806 890 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 WISP1O95388 367 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 BCL10O95999 233 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 SEMG1P04279 462 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PRKCAP17252 672 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 HK1P19367 917 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 FPR1P21462 350 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 SLC1A3P43003 542 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 IDH2P48735 452 aaKnown RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF41P51814 821 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 KCNC4Q03721 635 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 NPTX1Q15818 432 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 IQCCQ4KMZ1 466 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PRR30Q53SZ7 412 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 WIPI1Q5MNZ9 446 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 OTUD3Q5T2D3 398 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 GPR107Q5VW38 600 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 TRILQ7L0X0 811 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 TSEN54Q7Z6J9 526 aaKnown RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 VTCN1Q7Z7D3 282 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 LACC1Q8IV20 430 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 OFCC1Q8IZS5 231 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 SPARTQ8N0X7 666 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 GTPBP8Q8N3Z3 284 aaPredicted RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 OR6T1Q8NGN1 323 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 NEIL3Q8TAT5 605 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 TBC1D15Q8TC07 691 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
SF3B3-206ENST00000565990 S100ZQ8WXG8 99 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 TMEM234Q8WY98 164 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 PROX1Q92786 737 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 C7orf34Q96L11 122 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 MRGPRX4Q96LA9 322 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 MBOAT4Q96T53 435 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 NPAS1Q99742 590 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 IL1RAPQ9NPH3 570 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 SH3GLB1Q9Y371 365 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 ZGRF1Q86YA3 2104 aa11.41□□□□□ -0.58
SF3B3-206ENST00000565990 TRGV5A0A0B4J1U4 118 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 AQP7O14520 342 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 TFECO14948 347 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 SLC22A1O15245 554 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 FRS3O43559 492 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 CDC40O60508 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ATE1O95260 518 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ACTL6AO96019 429 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 EDN3P14138 238 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF17P17021 662 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 EEF1B2P24534 225 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 HTR2AP28223 471 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 DNAJA1P31689 397 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 APOBEC1P41238 236 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 MAP2K6P52564 334 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 MLLT10P55197 1068 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ISL1P61371 349 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 FOXK1P85037 733 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 HOXC5Q00444 222 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 BCL2A1Q16548 175 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 VASNQ6EMK4 673 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 WBP2NLQ6ICG8 309 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 LINC00114Q6XXX2 140 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms