RNA–Protein interactions for RNA: ENST00000565871.1

KIFC3-225, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-225	ENST00000565871	DLGAP1	O14490	977 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	KALRN	O60229	2985 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	MITF	O75030	526 aa	Predicted RBP	13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	SNAP29	O95721	258 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	FPR3	P25089	353 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	GDF1	P27539	372 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	CXADR	P78310	365 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	ALDH6A1	Q02252	535 aa	Known RBP	13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	CRYZ	Q08257	329 aa	Known RBP	13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	TOMM20	Q15388	145 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	ZIK1	Q3SY52	487 aa	Predicted RBP	13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	KLHL17	Q6TDP4	642 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	CD300LD	Q6UXZ3	194 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	TMPRSS11F	Q6ZWK6	438 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	GALNT5	Q7Z7M9	940 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	BPIFA2	Q96DR5	249 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	NPAS1	Q99742	590 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	OR2B2	Q9GZK3	357 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	TOR3A	Q9H497	397 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	CHRNA9	Q9UGM1	479 aa		13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	SPIN1	Q9Y657	262 aa	Predicted RBP	13.65	□□□□□ -0.22
KIFC3-225	ENST00000565871	ENO4	A6NNW6	628 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871		A8MVM7	634 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	SHISA8	B8ZZ34	492 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZNF208	O43345	1280 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	KLF4	O43474	513 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZIC3	O60481	467 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	RFPL3S	P0C7P2	107 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	OSM	P13725	252 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZNF17	P17021	662 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	TCEA1	P23193	301 aa	Known RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	GPR4	P46093	362 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	EGR4	Q05215	589 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	SELENBP1	Q13228	472 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	HYAL4	Q2M3T9	481 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	TMEM44	Q2T9K0	475 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	NHSL2	Q5HYW2	709 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	WLS	Q5T9L3	541 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	MEX3D	Q86XN8	651 aa	Known RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	P3H2	Q8IVL5	708 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	PARP8	Q8N3A8	854 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZFP62	Q8NB50	900 aa	Predicted RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZNF555	Q8NEP9	628 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	GPA33	Q99795	319 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	TTTY12	Q9BZ98	90 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	UBQLN3	Q9H347	655 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	RIBC2	Q9H4K1	309 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	C20orf141	Q9NUB4	165 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	QPCTL	Q9NXS2	382 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	RAB26	Q9ULW5	256 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	LRRC42	Q9Y546	428 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	CSAG2	Q9Y5P2	127 aa		13.64	□□□□□ -0.23
KIFC3-225	ENST00000565871	TRAV36DV7	A0A075B6V5	113 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	UNC119B	A6NIH7	251 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	EFCAB9	A8MZ26	197 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871		H0YAE9	185 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ACOT7	O00154	380 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ATXN7	O15265	892 aa	Predicted RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	TRAPPC6A	O75865	159 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	OR7A10	O76100	309 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	GLS	O94925	669 aa	Predicted RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	WISP1	O95388	367 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	AHSA1	O95433	338 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ITGB2	P05107	769 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	MAK	P20794	623 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	FKBP2	P26885	142 aa	Known RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ELK4	P28324	431 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ESRRG	P62508	458 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	NPRL3	Q12980	569 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	RAET1L	Q5VY80	246 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	TTC23	Q5W5X9	447 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	C3orf33	Q6P1S2	294 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	RASSF6	Q6ZTQ3	369 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	SLC22A16	Q86VW1	577 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	OR5M1	Q8NGP8	315 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	OR6S1	Q8NH40	331 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	OR14L1P	Q8NHC6	308 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	EXTL1	Q92935	676 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	DDIT4L	Q96D03	193 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	MBOAT4	Q96T53	435 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	PIGQ	Q9BRB3	760 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ADI1	Q9BV57	179 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	GABARAPL3	Q9BY60	117 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	POTEKP	Q9BYX7	375 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871		Q9H521	79 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	FAM118A	Q9NWS6	357 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	REV1	Q9UBZ9	1251 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	AP4B1	Q9Y6B7	739 aa		13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.63	□□□□□ -0.23
KIFC3-225	ENST00000565871	OR2M5	A3KFT3	312 aa		13.62	□□□□□ -0.23
KIFC3-225	ENST00000565871	EFNA2	O43921	213 aa		13.62	□□□□□ -0.23
KIFC3-225	ENST00000565871	NPIPB7	O75200	414 aa		13.62	□□□□□ -0.23
KIFC3-225	ENST00000565871	CH25H	O95992	272 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms