RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 TFPIP10646 304 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
KNOP1-203ENST00000565844 RCN1Q15293 331 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
KNOP1-203ENST00000565844 ZNF324BQ6AW86 544 aaPredicted RBP13.76□□□□□ -0.21
KNOP1-203ENST00000565844 GALNT11Q8NCW6 608 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 RELTQ969Z4 430 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 ASF1BQ9NVP2 202 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
KNOP1-203ENST00000565844 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
KNOP1-203ENST00000565844 MED12Q93074 2177 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 IGKV1D-42A0A075B6H8 117 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 TRBV4-1A0A0J9YWV2 114 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ZNF208O43345 1280 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 E2F6O75461 281 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ACTL6AO96019 429 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 OPN1LWP04000 364 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 BMP7P18075 431 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 SFTPDP35247 375 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 RBM34P42696 430 aaKnown RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 STARP49675 285 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 MAP2K6P52564 334 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 HSF1Q00613 529 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 EXOC3L2Q2M3D2 409 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 DCST1Q5T197 706 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 PODNL1Q6PEZ8 512 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 TTC33Q6PID6 262 aaPredicted RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 LINC00114Q6XXX2 140 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ZNF730Q6ZMV8 503 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 AMIGO2Q86SJ2 522 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 P3H2Q8IVL5 708 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 PRR7Q8TB68 274 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 SLC7A13Q8TCU3 470 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 SLC25A43Q8WUT9 341 aaPredicted RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ACOT11Q8WXI4 607 aaPredicted RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ABTB1Q969K4 478 aaPredicted RBP13.75□□□□□ -0.21
KNOP1-203ENST00000565844 DDIT4LQ96D03 193 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 HS6ST2Q96MM7 605 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 GPR137Q96N19 417 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ALPK1Q96QP1 1244 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 EPYCQ99645 322 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 PKP2Q99959 881 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 TMEM43Q9BTV4 400 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 ZNF426Q9BUY5 554 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 OR11A1Q9GZK7 315 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 SPRR3Q9UBC9 169 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 STOML1Q9UBI4 398 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 TMCC3Q9ULS5 477 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 AP4B1Q9Y6B7 739 aa13.75□□□□□ -0.21
KNOP1-203ENST00000565844 NBPF19A0A087WUL8 3843 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 A0A1B0GTH9 108 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 ZC3H12DA2A288 527 aaKnown RBP13.74□□□□□ -0.21
KNOP1-203ENST00000565844 GJE1A6NN92 205 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 A8MVM7 634 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 KPNA4O00629 521 aaPredicted RBP13.74□□□□□ -0.21
KNOP1-203ENST00000565844 AQP7O14520 342 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 SEC14L5O43304 696 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 BAG2O95816 211 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 FKBP2P26885 142 aaKnown RBP13.74□□□□□ -0.21
KNOP1-203ENST00000565844 SHC1P29353 583 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 IST1P53990 364 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 RAC1P63000 192 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 TMEM176BQ3YBM2 270 aaPredicted RBP13.74□□□□□ -0.21
KNOP1-203ENST00000565844 KRTCAP3Q53RY4 240 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 SYT14P1Q58G82 188 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 NHSL2Q5HYW2 709 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 HMBOX1Q6NT76 420 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 ARHGAP11AQ6P4F7 1023 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 UBQLNLQ8IYU4 475 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 GHDCQ8N2G8 530 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 OR4C15Q8NGM1 316 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 DNAJA3Q96EY1 480 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 SLX1AQ9BQ83 275 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 FUZQ9BT04 418 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 BDH2Q9BUT1 245 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 SEMA6AQ9H2E6 1030 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 TNFRSF10DQ9UBN6 386 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 MED31Q9Y3C7 131 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 KIAA1549Q9HCM3 1950 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
KNOP1-203ENST00000565844 A0A087WUU8 490 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 A1L4Q6 167 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 SH3PXD2BA1X283 911 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 PIP5K1CO60331 668 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 DNAJA1P31689 397 aaKnown RBP13.73□□□□□ -0.21
KNOP1-203ENST00000565844 LIMS1P48059 325 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 LHX2P50458 406 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 HMGA2P52926 109 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 UGT2B15P54855 530 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
KNOP1-203ENST00000565844 LAPTM4AQ15012 233 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 SEC23BQ15437 767 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 C1orf140Q5VVS0 124 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 VASNQ6EMK4 673 aa13.73□□□□□ -0.21
KNOP1-203ENST00000565844 TBPL2Q6SJ96 375 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms