RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CLOCKO15516 846 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 EIF1BO60739 113 aaKnown RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 GGT1P19440 569 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 TACR3P29371 465 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 RPS4XP62701 263 aaKnown RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 SLC35A1P78382 337 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 PPA1Q15181 289 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 DNAJC14Q6Y2X3 702 aaPredicted RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 CIARTQ8N365 385 aaPredicted RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 ZNF433Q8N7K0 673 aaPredicted RBP17.56■□□□□ 0.4
CLN6-206ENST00000565471 MUCL1Q96DR8 90 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 ITCHQ96J02 903 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 TPT1P8Q9HAU6 139 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 LAMP3Q9UQV4 416 aa17.56■□□□□ 0.4
CLN6-206ENST00000565471 TMEM72A0PK05 275 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 DPRXA6NFQ7 191 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 UBDO15205 165 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 ANP32DO95626 131 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 DANCRP0C864 163 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 CCNA2P20248 432 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 CRISP3P54108 245 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 OR2B6P58173 313 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 BSPH1Q075Z2 132 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 STK11Q15831 433 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 ZNF672Q499Z4 452 aaPredicted RBP17.55■□□□□ 0.4
CLN6-206ENST00000565471 LIN52Q52LA3 116 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 OR52P1PQ8NH57 321 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 OR52B2Q96RD2 323 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 ADAM19Q9H013 955 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 THUMPD1Q9NXG2 353 aaKnown RBP17.55■□□□□ 0.4
CLN6-206ENST00000565471 MALT1Q9UDY8 824 aa17.55■□□□□ 0.4
CLN6-206ENST00000565471 CDHR4A6H8M9 788 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 TRIM64A6NGJ6 449 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 TRIM64BA6NI03 449 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 OR5H1A6NKK0 313 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 OVOL3O00110 214 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 TFPTP0C1Z6 253 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 ETFAP13804 333 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 CRATP43155 626 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 POLR2JP52435 117 aaKnown RBP17.54■□□□□ 0.4
CLN6-206ENST00000565471 ATP5J2P56134 94 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 DSTNP60981 165 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 ZSWIM7Q19AV6 140 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 ZNF836Q6ZNA1 936 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 Q71RC1 249 aaPredicted RBP17.54■□□□□ 0.4
CLN6-206ENST00000565471 ATG4DQ86TL0 474 aaPredicted RBP17.54■□□□□ 0.4
CLN6-206ENST00000565471 CCDC103Q8IW40 242 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 UBE2J2Q8N2K1 259 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 MIER2Q8N344 545 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 KBTBD8Q8NFY9 601 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 SLC38A5Q8WUX1 472 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 DNAJA3Q96EY1 480 aa17.54■□□□□ 0.4
CLN6-206ENST00000565471 NAA11Q9BSU3 229 aaPredicted RBP17.54■□□□□ 0.4
CLN6-206ENST00000565471 NIPBLQ6KC79 2804 aaeCLIP17.53■□□□□ 0.4
CLN6-206ENST00000565471 FAM234BA2RU67 622 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 RAMP1O60894 148 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 MRPL33O75394 65 aaKnown RBP17.53■□□□□ 0.4
CLN6-206ENST00000565471 LY6G6DO95868 133 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 BCHEP06276 602 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 THBS1P07996 1170 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 IMPDH2P12268 514 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 NTF4P34130 210 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 GTDC1Q4AE62 458 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 RNF220Q5VTB9 566 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 PAQR6Q6TCH4 344 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 OR9I1Q8NGQ6 314 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 SMAP2Q8WU79 429 aaPredicted RBP17.53■□□□□ 0.4
CLN6-206ENST00000565471 TRIM2Q9C040 744 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 RLIMQ9NVW2 624 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 ASB6Q9NWX5 421 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 TAS2R16Q9NYV7 291 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 SLC9A8Q9Y2E8 581 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 USH1CQ9Y6N9 552 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 USF3Q68DE3 2245 aa17.53■□□□□ 0.4
CLN6-206ENST00000565471 ZC3H12DA2A288 527 aaKnown RBP17.52■□□□□ 0.4
CLN6-206ENST00000565471 RAD51DO75771 328 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 IGHV3-9P01782 118 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 SOD3P08294 240 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 ACAA2P42765 397 aaKnown RBP17.52■□□□□ 0.4
CLN6-206ENST00000565471 MRPL19P49406 292 aaKnown RBP17.52■□□□□ 0.4
CLN6-206ENST00000565471 ETFDHQ16134 617 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 C6orf10Q5SRN2 563 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 AGBL2Q5U5Z8 902 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 EPGNQ6UW88 154 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 VRK2Q86Y07 508 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 NEUROG1Q92886 237 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 VPS33AQ96AX1 596 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 AURKBQ96GD4 344 aaPredicted RBP17.52■□□□□ 0.4
CLN6-206ENST00000565471 C7orf26Q96N11 449 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 PARPBPQ9NWS1 579 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 NPAP1Q9NZP6 1156 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 ZNF443Q9Y2A4 671 aaPredicted RBP17.52■□□□□ 0.4
CLN6-206ENST00000565471 FLVCR1Q9Y5Y0 555 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 VPS13CQ709C8 3753 aa17.52■□□□□ 0.4
CLN6-206ENST00000565471 A0A0G2JPF8 293 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 A0A1W2PP18 115 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 CIB4A0PJX0 185 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 TMEM247A6NEH6 219 aa17.51■□□□□ 0.39
CLN6-206ENST00000565471 HNRNPCL2B2RXH8 293 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms