RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NSUN5P1Q3KNT7 163 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 LRRC23Q53EV4 343 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 EOGTQ5NDL2 527 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 FAM43BQ6ZT52 329 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 HTR3CQ8WXA8 447 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 FRAT1Q92837 279 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 FGF11Q92914 225 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 EFHD2Q96C19 240 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 CCNL2Q96S94 520 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 NPAS2Q99743 824 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 ARHGDIGQ99819 225 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 POLE4Q9NR33 117 aa3.1□□□□□ -1.91
CHD9-215ENST00000565442 C6orf203Q9P0P8 240 aaPredicted RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 PRPF19Q9UMS4 504 aaKnown RBP3.1□□□□□ -1.91
CHD9-215ENST00000565442 THSD7BQ9C0I4 1608 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 IGKV1D-8A0A087WSZ0 117 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 HELTA6NFD8 242 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 IDSB3KWA1 339 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 DCTN6O00399 190 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 POLR2DO15514 142 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 ATP5LO75964 103 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 SCGNO76038 276 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 AP2A1O95782 977 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 OPN1MWP04001 364 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 DUX4L4P0CJ87 422 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 OPN1MW2P0DN77 364 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 OPN1MW3P0DN78 364 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 MAP3K8P41279 467 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 EFNB2P52799 333 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 APOC4P55056 127 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 PKNOX1P55347 436 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 GNB2P62879 340 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 GRB7Q14451 532 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 SLC15A2Q16348 729 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 EXOC3L2Q2M3D2 409 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 DMRTC1Q5HYR2 192 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 OR4F3Q6IEY1 312 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 NLRP9Q7RTR0 991 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 ZNF740Q8NDX6 193 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 SETD7Q8WTS6 366 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 C7orf33Q8WU49 177 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 IMMP1LQ96LU5 166 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 RBM14Q96PK6 669 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 PSKH2Q96QS6 385 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 TMEM43Q9BTV4 400 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 CAPS2Q9BXY5 557 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 POLR2J2Q9GZM3 115 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 POLR2J3Q9H1A7 115 aaKnown RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 ABCB10Q9NRK6 738 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 BTNL2Q9UIR0 455 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 CDH9Q9ULB4 789 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 NAP1L2Q9ULW6 460 aaPredicted RBP3.09□□□□□ -1.91
CHD9-215ENST00000565442 STAP1Q9ULZ2 295 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 COPS3Q9UNS2 423 aa3.09□□□□□ -1.91
CHD9-215ENST00000565442 FRMPD3Q5JV73 1810 aa3.09□□□□□ -1.92
CHD9-215ENST00000565442 TRAV26-1A0A087WT03 109 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 HIP1O00291 1037 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 ABCD4O14678 606 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 MBTPS2O43462 519 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 SUPT7LO94864 414 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 SNAPINO95295 136 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 STAMBPO95630 424 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 LGI1O95970 557 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 IL1BP01584 269 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 ELK1P19419 428 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 CALRP27797 417 aaKnown RBP3.08□□□□□ -1.92
CHD9-215ENST00000565442 GNA11P29992 359 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 CALCRP30988 508 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 SHMT2P34897 504 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 PTGDSP41222 190 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 GRIA1P42261 906 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 KLK7P49862 253 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 AIF1P55008 147 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 ORC2Q13416 577 aaPredicted RBP3.08□□□□□ -1.92
CHD9-215ENST00000565442 IL17AQ16552 155 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 DPYSL2Q16555 572 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 KLF17Q5JT82 389 aaPredicted RBP3.08□□□□□ -1.92
CHD9-215ENST00000565442 PDZK1Q5T2W1 519 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 OR2G6Q5TZ20 316 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 OTPQ5XKR4 325 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 Q6ZPB1 254 aaPredicted RBP3.08□□□□□ -1.92
CHD9-215ENST00000565442 FTMTQ8N4E7 242 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 MFSD9Q8NBP5 474 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 OR5D13Q8NGL4 314 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 FBXO30Q8TB52 745 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 TIMD4Q96H15 378 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 COQ2Q96H96 371 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 SLC38A2Q96QD8 506 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 RNF2Q99496 336 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 CCT7Q99832 543 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 GON7Q9BXV9 100 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 RBKSQ9H477 322 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 ZDHHC11Q9H8X9 412 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 SH2D2AQ9NP31 389 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 HOXC10Q9NYD6 342 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 KIF25Q9UIL4 384 aa3.08□□□□□ -1.92
CHD9-215ENST00000565442 V9GY05 133 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms