RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZNF324O75467 553 aaPredicted RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 H2BFMP0C1H6 154 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 NCF1P14598 390 aaPredicted RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 CXCR2P25025 360 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 HTR2AP28223 471 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 YWHABP31946 246 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 SHMT2P34897 504 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 HNRNPA3P51991 378 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 HSD17B7P56937 341 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 HERVK_113P61574 105 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 RPS14P62263 151 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 CNTN2Q02246 1040 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 KCTD19Q17RG1 926 aaPredicted RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 USH1GQ495M9 461 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 FAM71F2Q6NXP2 309 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 TMIGD1Q6UXZ0 262 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 ZNF571Q7Z3V5 609 aaPredicted RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 FTMTQ8N4E7 242 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 DHRSXQ8N5I4 330 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 OR10A7Q8NGE5 316 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 OR4D9Q8NGE8 314 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 NDRG1Q92597 394 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 RIT2Q99578 217 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 ZNF670Q9BS34 389 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 SELENOIQ9C0D9 397 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 OR11A1Q9GZK7 315 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 SLC17A5Q9NRA2 495 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 NUDT15Q9NV35 164 aa2.49□□□□□ -2.01
PALB2-203ENST00000565038 NUFIP1Q9UHK0 495 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 AK6Q9Y3D8 172 aaKnown RBP2.49□□□□□ -2.01
PALB2-203ENST00000565038 SF3B1O75533 1304 aaKnown RBP eCLIP2.48□□□□□ -2.01
PALB2-203ENST00000565038 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 IGHV1OR21-1A0A087WYE8 117 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 A0A096LNJ9 63 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 IGHV3-64DA0A0J9YX35 117 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 TCP11X1B4DZS4 312 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 NBR2O15453 112 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 CLDN3O15551 220 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 MBTPS2O43462 519 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 STAMBPO95630 424 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 ICAM2P13598 275 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 CRISP2P16562 243 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 PTGDSP41222 190 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 VDAC2P45880 294 aaPredicted RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 KPNA2P52292 529 aaKnown RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 CSTF1Q05048 431 aaKnown RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 NCR3LG1Q68D85 454 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 C11orf71Q6IPW1 123 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 SYT10Q6XYQ8 523 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 LINC01551Q86U37 167 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 ZNF573Q86YE8 665 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 RDH10Q8IZV5 341 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 CLDN19Q8N6F1 224 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 FADS6Q8N9I5 356 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 CATSPER1Q8NEC5 780 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 OR6C4Q8NGE1 309 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 OR9G1Q8NH87 305 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 RAET1EQ8TD07 263 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 SPRYD4Q8WW59 207 aaPredicted RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 FAM3CQ92520 227 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 OSTF1Q92882 214 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 TIMD4Q96H15 378 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 PELOQ9BRX2 385 aaKnown RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 EDEM2Q9BV94 578 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 POLR1EQ9GZS1 481 aaKnown RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 FOLH1BQ9HBA9 442 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 SMPD3Q9NY59 655 aaPredicted RBP2.48□□□□□ -2.01
PALB2-203ENST00000565038 TBK1Q9UHD2 729 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 STAP1Q9ULZ2 295 aa2.48□□□□□ -2.01
PALB2-203ENST00000565038 SH3TC1Q8TE82 1336 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 SCRIBQ14160 1630 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 TRDCB7Z8K6 153 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 C11orf94C9JXX5 98 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 NPIPA7E9PJI5 369 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 PPIAL4DF5H284 164 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 DLGAP1O14490 977 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 MAPK13O15264 365 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 CXCL13O43927 109 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 WISP3O95389 354 aaPredicted RBP2.47□□□□□ -2.01
PALB2-203ENST00000565038 LGALS2P05162 132 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 NPIPA8P0DM63 369 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 MAGP20916 626 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 RIPK1Q13546 671 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 PSG5Q15238 335 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 SLC25A52Q3SY17 297 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 BCL7AQ4VC05 210 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 TPGS2Q68CL5 300 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 TIGD3Q6B0B8 471 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 CTRB2Q6GPI1 263 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 OR52W1Q6IF63 320 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 PRSS41Q7RTY9 318 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 SLC38A6Q8IZM9 456 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 TMEM61Q8N0U2 210 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 DUSP18Q8NEJ0 188 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 OR10G3Q8NGC4 313 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 OR6X1Q8NH79 312 aa2.47□□□□□ -2.01
PALB2-203ENST00000565038 CCDC110Q8TBZ0 833 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms