RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 VDAC3Q9Y277 283 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 KLF13Q9Y2Y9 288 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-205ENST00000564899 NF1P21359 2839 aa10.05□□□□□ -0.8
SF3B3-205ENST00000564899 PDZD2O15018 2839 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DOCK10Q96BY6 2186 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 A0A087WUJ7 227 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 A0A087WZY1 265 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PINLYPA6NC86 204 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ENO4A6NNW6 628 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 KPNA4O00629 521 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 CBR3O75828 277 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ADAP00813 363 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PRKCAP17252 672 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 TCEA1P23193 301 aaKnown RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 CXCR1P25024 350 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DPP4P27487 766 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 HTR3AP46098 478 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 TNFSF10P50591 281 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DAPP51397 102 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 POLR2HP52434 150 aaKnown RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DLX5P56178 289 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DSCR4P56555 118 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 IL1RL1Q01638 556 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PLPPR5Q32ZL2 321 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF766Q5HY98 468 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF770Q6IQ21 691 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PGBD2Q6P3X8 592 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 TTC33Q6PID6 262 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 POMZP3Q6PJE2 187 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 GALNTL5Q7Z4T8 443 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 LSRQ86X29 649 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 RNF113BQ8IZP6 322 aaKnown RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM178AQ8NBL3 297 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 SSC4DQ8WTU2 575 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 GTPBP3Q969Y2 492 aaKnown RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZBTB8AQ96BR9 441 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 DTNBP1Q96EV8 351 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 GNRHR2Q96P88 292 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF426Q9BUY5 554 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF556Q9HAH1 456 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 TMEFF2Q9UIK5 374 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 OSGIN1Q9UJX0 560 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 MGAT4BQ9UQ53 548 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 C15orf41Q9Y2V0 281 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 MED31Q9Y3C7 131 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PCDHGB6Q9Y5F9 930 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 PCDHGA9Q9Y5G4 932 aaKnown RBP10.04□□□□□ -0.8
SF3B3-205ENST00000564899 ORC6Q9Y5N6 252 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 F8P00451 2351 aa10.04□□□□□ -0.8
SF3B3-205ENST00000564899 NINQ8N4C6 2090 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 IGKV1D-42A0A075B6H8 117 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TMED7-TICAM2A0A0A6YYA0 188 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SHISA8B8ZZ34 492 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 H0YJX3 145 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 KLRC4-KLRK1H3BQV0 150 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ETV2O00321 342 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 MITFO75030 526 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 GASTP01350 101 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 IFI30P13284 250 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 POU2F1P14859 743 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 CDH2P19022 906 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 HK1P19367 917 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 CCNA2P20248 432 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SRD5A2P31213 254 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 EIF1P41567 113 aaKnown RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 HSPA13P48723 471 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 MEOX1P50221 254 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 RAD23AP54725 363 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ALDH6A1Q02252 535 aaKnown RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 CRYZQ08257 329 aaKnown RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 FOXO1Q12778 655 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 RFX4Q33E94 735 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SLC25A53Q5H9E4 307 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 KDM4DQ6B0I6 523 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 C1orf94Q6P1W5 598 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ZER1Q7Z7L7 766 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 GALNT5Q7Z7M9 940 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ATCAYQ86WG3 371 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 P3H2Q8IVL5 708 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SULF2Q8IWU5 870 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 CPAMD8Q8IZJ3 1885 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ZADH2Q8N4Q0 377 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 PFN4Q8NHR9 129 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 GNPDA2Q8TDQ7 276 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 DNAJC9Q8WXX5 260 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 FAM46AQ96IP4 442 aaKnown RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 RDH12Q96NR8 316 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF184Q99676 751 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-205ENST00000564899 NIPSNAP1Q9BPW8 284 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM43Q9BTV4 400 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 DGCR6LQ9BY27 220 aa10.03□□□□□ -0.8
SF3B3-205ENST00000564899 SLC19A3Q9BZV2 496 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms