RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 BNIP2Q12982 314 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 MYBPHQ13203 477 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 SLC25A35Q3KQZ1 300 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 MAMDC2Q7Z304 686 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 ATG4DQ86TL0 474 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 COMTD1Q86VU5 262 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 CARM1Q86X55 608 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 GCNT2Q8N0V5 402 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 CNEP1R1Q8N9A8 125 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 RBM15BQ8NDT2 890 aaKnown RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 OR6T1Q8NGN1 323 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 ROBO4Q8WZ75 1007 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 PSMG3-AS1Q96PY0 264 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 NAA11Q9BSU3 229 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 TAPBPLQ9BX59 468 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 OR11A1Q9GZK7 315 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 C1orf21Q9H246 121 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 C12orf10Q9HB07 376 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 CHST11Q9NPF2 352 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 GMPR2Q9P2T1 348 aaKnown RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 PACSIN3Q9UKS6 424 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 KLF2Q9Y5W3 355 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 NCOA6Q14686 2063 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-208ENST00000564703 DOCK7Q96N67 2140 aa14.32□□□□□ -0.12
RAB40C-208ENST00000564703 DOPEY2Q9Y3R5 2298 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 TENM4Q6N022 2769 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 CPSF4LA6NMK7 179 aaKnown RBP14.31□□□□□ -0.12
RAB40C-208ENST00000564703 FAM90A27PA6NNH2 459 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 AQP8O94778 261 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 PRKD3O94806 890 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 SERPINA1P01009 418 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 NCK1P16333 377 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 HTR2AP28223 471 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 IDUAP35475 653 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 AGFG1P52594 562 aaKnown RBP14.31□□□□□ -0.12
RAB40C-208ENST00000564703 RNPS1Q15287 305 aaKnown RBP14.31□□□□□ -0.12
RAB40C-208ENST00000564703 ENTPD8Q5MY95 495 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 ZNF613Q6PF04 617 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 RINLQ6ZS11 566 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 CBLL1Q75N03 491 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 FCRLAQ7L513 359 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 MED12LQ86YW9 2145 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 NAXEQ8NCW5 288 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 STK35Q8TDR2 534 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 ARL5BQ96KC2 179 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 SFXN3Q9BWM7 321 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 UCK2Q9BZX2 261 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 COQ10BQ9H8M1 238 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 RNF122Q9H9V4 155 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 CD300AQ9UGN4 299 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 MAGEL2Q9UJ55 1249 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 EMC9Q9Y3B6 208 aa14.31□□□□□ -0.12
RAB40C-208ENST00000564703 TRAPPC13A5PLN9 417 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 PRSS44E7EML9 344 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 GYG2O15488 501 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 DNPH1O43598 174 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 OR2T1O43869 369 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 EIF1BO60739 113 aaKnown RBP14.3□□□□□ -0.12
RAB40C-208ENST00000564703 UBOX5O94941 541 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 STAMBPO95630 424 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 GPIP06744 558 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 CPOXP36551 454 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 OR1E2P47887 323 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 CRYBA2P53672 197 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 ZNF239Q16600 458 aaKnown RBP14.3□□□□□ -0.12
RAB40C-208ENST00000564703 SWT1Q5T5J6 900 aaKnown RBP14.3□□□□□ -0.12
RAB40C-208ENST00000564703 C1orf140Q5VVS0 124 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 C5orf46Q6UWT4 87 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 DEF8Q6ZN54 512 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 LIX1LQ8IVB5 337 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 FAM156AQ8NDB6 213 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 SLC38A4Q969I6 547 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 DNAJA3Q96EY1 480 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 GMPPAQ96IJ6 420 aaPredicted RBP14.3□□□□□ -0.12
RAB40C-208ENST00000564703 EPYCQ99645 322 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 WFDC6Q9BQY6 131 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 SRXN1Q9BYN0 137 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 PIGMQ9H3S5 423 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 GORASP2Q9H8Y8 452 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 TAS2R1Q9NYW7 299 aa14.3□□□□□ -0.12
RAB40C-208ENST00000564703 SAMD4AQ9UPU9 718 aaKnown RBP14.3□□□□□ -0.12
RAB40C-208ENST00000564703 USP9XQ93008 2570 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 A0A087WUJ7 227 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 A0A1W2PNV4 684 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 TPST2O60704 377 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 SMNDC1O75940 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 AHSA1O95433 338 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 IFNW1P05000 195 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 FPR1P21462 350 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 GTF2E2P29084 291 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 MSX2P35548 267 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 RASSF2P50749 326 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 CDH12P55289 794 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 TAS2R41P59536 307 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 SIRPAP78324 504 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 RASGEF1BQ0VAM2 473 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 FOXF2Q12947 444 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 CEACAM7Q14002 265 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 IFI44LQ53G44 452 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 TMEM201Q5SNT2 666 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms