RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 C16orf47Q6ZP98 133 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-210ENST00000564587 CLVS1Q8IUQ0 354 aaPredicted RBP14.17□□□□□ -0.14
COMMD4-210ENST00000564587 ANKK1Q8NFD2 765 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 OR6S1Q8NH40 331 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 OR51A7Q8NH64 312 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 STK35Q8TDR2 534 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 ASB15Q8WXK1 588 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 TMEM80Q96HE8 168 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 TNFRSF13CQ96RJ3 184 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 RTN4RQ9BZR6 473 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 LHPPQ9H008 270 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF160Q9HCG1 818 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 AMBNQ9NP70 447 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 CMC2Q9NRP2 79 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 GPR83Q9NYM4 423 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 FOXJ2Q9P0K8 574 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 PPP4R1LQ9P1A2 415 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 OSGIN1Q9UJX0 560 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 SLC6A5Q9Y345 797 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 COMMD3-BMI1R4GMX3 469 aa14.17□□□□□ -0.14
COMMD4-210ENST00000564587 IGKV1D-42A0A075B6H8 117 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 TRAV36DV7A0A075B6V5 113 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 A0A1W2PNU3 283 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 RIIAD1A6NNX1 92 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 FADS2O95864 444 aaKnown RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 CH25HO95992 272 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 MT-ATP6P00846 226 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 HIST1H2ABP04908 130 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 SERPINA7P05543 415 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 STSP08842 583 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 PEPDP12955 493 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 PAICSP22234 425 aaKnown RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 DLSTP36957 453 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 APOBEC1P41238 236 aaKnown RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 MLF1P58340 268 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 FXYD6P3P58550 94 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF91Q05481 1191 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 RAB40BQ12829 278 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 IRF3Q14653 427 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF74Q16587 644 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 JMJD6Q6NYC1 403 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-210ENST00000564587 B3GNT6Q6ZMB0 384 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 HIST3H2AQ7L7L0 130 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 GPALPP1Q8IXQ4 340 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 OR5M3Q8NGP4 307 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 HIST1H2ACQ93077 130 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 FKRPQ9H9S5 495 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 NANSQ9NR45 359 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF229Q9UJW7 825 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 WIF1Q9Y5W5 379 aa14.16□□□□□ -0.14
COMMD4-210ENST00000564587 OTOGLQ3ZCN5 2332 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 TRAV27A0A087WT01 109 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 TMED7-TICAM2A0A0A6YYA0 188 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 A8MVM7 634 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ETV2O00321 342 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ADAM10O14672 748 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 GNB5O14775 395 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ARPC3O15145 178 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 OR2T1O43869 369 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 APEHP13798 732 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF3P17036 446 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 FKBP2P26885 142 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 MST1P26927 711 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 MASP1P48740 699 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 CLDN6P56747 220 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 RPS4XP62701 263 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 AADACL4Q5VUY2 407 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 H3F3CQ6NXT2 135 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 CCDC81Q6ZN84 652 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 CXXC5Q7LFL8 322 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ZNF367Q7RTV3 350 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 SLC46A3Q7Z3Q1 461 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 C10orf53Q8N6V4 93 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 OR10G3Q8NGC4 313 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 RAB2BQ8WUD1 216 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 SGCZQ96LD1 299 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 GPX7Q96SL4 187 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 DOK1Q99704 481 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 CDCP1Q9H5V8 836 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 PTGES2Q9H7Z7 377 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 MCCC2Q9HCC0 563 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 CHCHD3Q9NX63 227 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 WARS2Q9UGM6 360 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 DIMT1Q9UNQ2 313 aaKnown RBP14.15□□□□□ -0.14
COMMD4-210ENST00000564587 ERGIC3Q9Y282 383 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 HIF3AQ9Y2N7 669 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 TMED7Q9Y3B3 224 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 KNTC1P50748 2209 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 WDR87Q6ZQQ6 2873 aa14.15□□□□□ -0.14
COMMD4-210ENST00000564587 LAMA1P25391 3075 aa14.14□□□□□ -0.15
COMMD4-210ENST00000564587 CACNA1BQ00975 2339 aa14.14□□□□□ -0.15
COMMD4-210ENST00000564587 DMDP11532 3685 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms