RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 C19orf24Q9BVV8 132 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 OR11A1Q9GZK7 315 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 OR51I1Q9H343 314 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 EXOSC3Q9NQT5 275 aaKnown RBP12.35□□□□□ -0.43
CDR2-204ENST00000564542 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 TMEM181Q9P2C4 612 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 TRAPPC4Q9Y296 219 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 WDR45Q9Y484 360 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 FKBP7Q9Y680 259 aa12.35□□□□□ -0.43
CDR2-204ENST00000564542 VWC2LB2RUY7 222 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 NDUFS8O00217 210 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 LY6HO94772 140 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ARRB2P32121 409 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 RYKP34925 604 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 OR2B6P58173 313 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 PLAURQ03405 335 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 MAD2L1Q13257 205 aaPredicted RBP12.34□□□□□ -0.43
CDR2-204ENST00000564542 ATAD3BQ5T9A4 648 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 OR4F3Q6IEY1 312 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 FAM166AQ6J272 317 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ARIH2OSQ8N7S6 290 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 SAP130Q9H0E3 1048 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 PARPBPQ9NWS1 579 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ASIC5Q9NY37 505 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
CDR2-204ENST00000564542 UPB1Q9UBR1 384 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 KCNS2Q9ULS6 477 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 PCDHGB4Q9UN71 923 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 FLVCR1Q9Y5Y0 555 aa12.34□□□□□ -0.43
CDR2-204ENST00000564542 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 EIF1BO60739 113 aaKnown RBP12.33□□□□□ -0.44
CDR2-204ENST00000564542 OR12D1P0DN82 309 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 HTR3AP46098 478 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 PDLIM4P50479 330 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 SLC35A1P78382 337 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 EMX2Q04743 252 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 FUT5Q11128 374 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 FRRS1Q6ZNA5 592 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 ARFGAP2Q8N6H7 521 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 OR8J2Q8NGG1 315 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 OR4A15Q8NGL6 344 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 KIF18AQ8NI77 898 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 ROPN1LQ96C74 230 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 PIMREGQ9BSJ6 248 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 SLC7A10Q9NS82 523 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 SLC17A7Q9P2U7 560 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 MALRD1Q5VYJ5 2156 aa12.33□□□□□ -0.44
CDR2-204ENST00000564542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.444e-8■■■□□ 15.2
CDR2-204ENST00000564542 TMED7-TICAM2A0A0A6YYA0 188 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 ZNF208O43345 1280 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 WNT11O96014 354 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 CCNA2P20248 432 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 UQCRC2P22695 453 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 MPGP29372 298 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 NR4A2P43354 598 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
CDR2-204ENST00000564542 KHKP50053 298 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 PRPS1P60891 318 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 SNRPD2P62316 118 aaKnown RBP12.32□□□□□ -0.44
CDR2-204ENST00000564542 KCNJ10P78508 379 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 HPCAP84074 193 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 GGTLC2Q14390 218 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 SMU1Q2TAY7 513 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 TSPO2Q5TGU0 170 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
CDR2-204ENST00000564542 KLHL24Q6TFL4 600 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 XAGE5Q8WWM1 108 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 RAB8BQ92930 207 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 ZG16BQ96DA0 208 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 FBXO17Q96EF6 278 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 NAA11Q9BSU3 229 aaPredicted RBP12.32□□□□□ -0.44
CDR2-204ENST00000564542 PRR14Q9BWN1 585 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
CDR2-204ENST00000564542 TMED7Q9Y3B3 224 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 ARFGEF3Q5TH69 2177 aa12.32□□□□□ -0.44
CDR2-204ENST00000564542 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
CDR2-204ENST00000564542 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 TMEM72A0PK05 275 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 SLC35F4A4IF30 521 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 CLDN24A6NM45 220 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 HAX1O00165 279 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 AP3D1O14617 1153 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 NUDT17P0C025 328 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 IMPDH2P12268 514 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 HNF1AP20823 631 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms