RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 SLC35A1P78382 337 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 KLF10Q13118 480 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 TRMT5Q32P41 509 aaKnown RBP11.94□□□□□ -0.5
CLK3-216ENST00000564468 CGB2Q6NT52 195 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 DHRS4L2Q6PKH6 230 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 TUSC5Q8IXB3 177 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 PIGXQ8TBF5 258 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 ZNF317Q96PQ6 595 aaPredicted RBP11.94□□□□□ -0.5
CLK3-216ENST00000564468 NAA11Q9BSU3 229 aaPredicted RBP11.94□□□□□ -0.5
CLK3-216ENST00000564468 POLDIP3Q9BY77 421 aaKnown RBP11.94□□□□□ -0.5
CLK3-216ENST00000564468 POTEKPQ9BYX7 375 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 C12orf49Q9H741 205 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 BCO1Q9HAY6 547 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 RASSF1Q9NS23 344 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 GID8Q9NWU2 228 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 EMC3Q9P0I2 261 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
CLK3-216ENST00000564468 IGHV3-15A0A0B4J1V0 119 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 TMEM72A0PK05 275 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 FAM221AA4D161 298 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 ZNF724A8MTY0 619 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 GPR171O14626 319 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 SMAD9O15198 467 aaKnown RBP11.93□□□□□ -0.5
CLK3-216ENST00000564468 CCDC22O60826 627 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 FESP07332 822 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 CD1EP15812 388 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 PPP3CBP16298 524 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 CCNA2P20248 432 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 UGT2B10P36537 528 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 OR2B6P58173 313 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 PDK3Q15120 406 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 EXOC3L2Q2M3D2 409 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 INTS11Q5TA45 600 aaKnown RBP11.93□□□□□ -0.5
CLK3-216ENST00000564468 SERPINA11Q86U17 422 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 CDH24Q86UP0 819 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 ARL5BQ96KC2 179 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 PSD2Q9BQI7 771 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 GPATCH1Q9BRR8 931 aaKnown RBP11.93□□□□□ -0.5
CLK3-216ENST00000564468 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 KLHL4Q9C0H6 718 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 OR10A4Q9H209 315 aa11.93□□□□□ -0.5
CLK3-216ENST00000564468 A8MVM7 634 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 MRASO14807 208 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 GPIP06744 558 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 IDUAP35475 653 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 MTPNP58546 118 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 NCALDP61601 193 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 SF3A3Q12874 501 aaKnown RBP eCLIP11.92□□□□□ -0.55e-6■■■■■ 35.2
CLK3-216ENST00000564468 TESK1Q15569 626 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 ADRM1Q16186 407 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 GALNT5Q7Z7M9 940 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
CLK3-216ENST00000564468 ARMC8Q8IUR7 673 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 C10orf111Q8N326 155 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 OR8J3Q8NGG0 315 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 C10orf82Q8WW14 230 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 LRRC58Q96CX6 371 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 USB1Q9BQ65 265 aaKnown RBP11.92□□□□□ -0.5
CLK3-216ENST00000564468 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 TAPBPLQ9BX59 468 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 TRIM2Q9C040 744 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 OR11A1Q9GZK7 315 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 NSRP1Q9H0G5 558 aaKnown RBP11.92□□□□□ -0.5
CLK3-216ENST00000564468 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
CLK3-216ENST00000564468 KAT8Q9H7Z6 458 aaKnown RBP11.92□□□□□ -0.5
CLK3-216ENST00000564468 C12orf10Q9HB07 376 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 GPR52Q9Y2T5 361 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 CHST2Q9Y4C5 530 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 TESMINQ9Y4I5 508 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 ABCA2Q9BZC7 2435 aa11.92□□□□□ -0.5
CLK3-216ENST00000564468 IGKV3D-15A0A087WSY6 115 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 LOC100653049A0A140TA62 436 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 FBP2O00757 339 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 KRT34O76011 436 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 PRG2P13727 222 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 RGS8P57771 180 aaPredicted RBP11.91□□□□□ -0.5
CLK3-216ENST00000564468 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
CLK3-216ENST00000564468 REP15Q6BDI9 236 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 ABLIM2Q6H8Q1 611 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 NANOGP8Q6NSW7 305 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 C5orf46Q6UWT4 87 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 TFAP2EQ6VUC0 442 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 NUFIP2Q7Z417 695 aaKnown RBP11.91□□□□□ -0.5
CLK3-216ENST00000564468 NET1Q7Z628 596 aaPredicted RBP11.91□□□□□ -0.5
CLK3-216ENST00000564468 SNX32Q86XE0 403 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 PTOV1Q86YD1 416 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 STEAP2Q8NFT2 490 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 OR10A6Q8NH74 314 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 RP9Q8TA86 221 aaKnown RBP11.91□□□□□ -0.5
CLK3-216ENST00000564468 STK35Q8TDR2 534 aa11.91□□□□□ -0.5
CLK3-216ENST00000564468 SLC26A7Q8TE54 656 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms