RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TBK1Q9UHD2 729 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 BAIAP2L1Q9UHR4 511 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 DTNAQ9Y4J8 743 aa8.97□□□□□ -0.97
SF3B3-204ENST00000563739 B9A039 149 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SULT2B1O00204 365 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 KLF11O14901 512 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF264O43296 627 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 EIF4E2O60573 245 aaKnown RBP8.96□□□□□ -0.98
SF3B3-204ENST00000563739 PMS2P2O95744 297 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 OR4A8P0C604 315 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 CECR9P0C854 216 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 HPGDP15428 266 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SERPINF1P36955 418 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 P2RY4P51582 365 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SNRPD2P62316 118 aaKnown RBP8.96□□□□□ -0.98
SF3B3-204ENST00000563739 TUBA1BP68363 451 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 TUBA4AP68366 448 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 CBX1P83916 185 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 NAAAQ02083 359 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 IFFO1Q0D2I5 559 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SLC17A1Q14916 467 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF141Q15928 474 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 RFTN2Q52LD8 501 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ELFN2Q5R3F8 820 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 OR7E24Q6IFN5 339 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 CASP12Q6UXS9 341 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 FRMD7Q6ZUT3 714 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 TUBA1AQ71U36 451 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SLC46A3Q7Z3Q1 461 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SPATA19Q7Z5L4 167 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 CDK20Q8IZL9 346 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 RIBC1Q8N443 379 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-204ENST00000563739 C3orf56Q8N813 242 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 TOR1AIP2Q8NFQ8 470 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 OR5D16Q8NGK9 328 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ACMSDQ8TDX5 336 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ST8SIA1Q92185 356 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 JADE3Q92613 823 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF385AQ96PM9 386 aaKnown RBP8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SLC38A2Q96QD8 506 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 SDF2Q99470 211 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 LAT2Q9GZY6 243 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 G6PC2Q9NQR9 355 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 EMC3Q9P0I2 261 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 GIMAP2Q9UG22 337 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 PCDHGB1Q9Y5G3 927 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 WNK2Q9Y3S1 2297 aa8.96□□□□□ -0.98
SF3B3-204ENST00000563739 WNK1Q9H4A3 2382 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 DNAH3Q8TD57 4116 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 ZC3H12DA2A288 527 aaKnown RBP8.95□□□□□ -0.98
SF3B3-204ENST00000563739 FCMRO60667 390 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 UGT2B17O75795 530 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 HSPA4LO95757 839 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 FSHBP01225 129 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 C1QCP02747 245 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 PGM1P36871 562 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 CCR4P51679 360 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 LMO4P61968 165 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 RPS26P62854 115 aaKnown RBP8.95□□□□□ -0.98
SF3B3-204ENST00000563739 MERTKQ12866 999 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 TBRG1Q3YBR2 411 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 AP1ARQ63HQ0 302 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 CLEC6AQ6EIG7 209 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 THSD4Q6ZMP0 1018 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 USP43Q70EL4 1123 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 ADGRG3Q86Y34 549 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 SVOPLQ8N434 492 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 TMCO5AQ8N6Q1 288 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 OR7A2PQ8NGA2 310 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 PIGXQ8TBF5 258 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 TMEM45BQ96B21 275 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 OR7D2Q96RA2 312 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 KATNB1Q9BVA0 655 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 NMUR2Q9GZQ4 415 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 LGALS13Q9UHV8 139 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 ATP6V1HQ9UI12 483 aa8.95□□□□□ -0.98
SF3B3-204ENST00000563739 A0A0G2JK05 382 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 PRAMEF27A3QJZ7 478 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 NR5A2O00482 541 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 LSM1O15116 133 aaKnown RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 DNPH1O43598 174 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 MRPL33O75394 65 aaKnown RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 NCR1O76036 304 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 LAMP1P11279 417 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 BMP4P12644 408 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 DDX5P17844 614 aaKnown RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 MPGP29372 298 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 THBS4P35443 961 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 KHKP50053 298 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 CSNK2A1P68400 391 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 CBFBQ13951 182 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 LIPMQ5VYY2 423 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZNF614Q8N883 585 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 OR1K1Q8NGR3 316 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 ZFP28Q8NHY6 868 aa8.94□□□□□ -0.98
SF3B3-204ENST00000563739 SLC25A43Q8WUT9 341 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 BCL2L2Q92843 193 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-204ENST00000563739 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms