RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 C16orf97H3BN30 126 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 FRS3O43559 492 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 PSMB1P20618 241 aaKnown RBP13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 FKBP2P26885 142 aaKnown RBP13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 HTR2AP28223 471 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 MDH1P40925 334 aaKnown RBP13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 MAP2K6P52564 334 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 CDK6Q00534 326 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 EGR4Q05215 589 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 GNA13Q14344 377 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 SERINC1Q9NRX5 453 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 KLHL28Q9NXS3 571 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 NDUFAF1Q9Y375 327 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 MED13LQ71F56 2210 aa13.13□□□□□ -0.31
RPUSD1-204ENST00000563560 CADP27708 2225 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 SULT2B1O00204 365 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 PLGP00747 810 aaPredicted RBP13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 OR3A2P47893 321 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 CTBP2P56545 445 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 CBX1P83916 185 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 HOXC5Q00444 222 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 DMTNQ08495 405 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 RASGEF1BQ0VAM2 473 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 KLF10Q13118 480 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 LARS2Q15031 903 aaKnown RBP13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 CALHM3Q86XJ0 350 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 LSMEM1Q8N8F7 131 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 SLC39A3Q9BRY0 314 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 POTEKPQ9BYX7 375 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 CXXC4Q9H2H0 198 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 KLHL14Q9P2G3 628 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 KLHL9Q9P2J3 617 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 CORO2BQ9UQ03 480 aa13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
RPUSD1-204ENST00000563560 LIPT2A6NK58 231 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 KLF4O43474 513 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 MFN2O95140 757 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 COX5AP20674 150 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 ARFIP2P53365 341 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 MTPNP58546 118 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 CSNK2A1P68400 391 aaPredicted RBP13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 GABPB1Q06547 395 aaPredicted RBP13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 SCARB2Q14108 478 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 BEND4Q6ZU67 534 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 CCDC103Q8IW40 242 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 NINJ1Q92982 152 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 PTDSS2Q9BVG9 487 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 NDRG3Q9UGV2 375 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 PRSS50Q9UI38 385 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 ADAM21Q9UKJ8 722 aa13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 FLNAP21333 2647 aaKnown RBP13.11□□□□□ -0.31
RPUSD1-204ENST00000563560 IGKV1D-42A0A075B6H8 117 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 ENO4A6NNW6 628 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 PDLIM1O00151 329 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 ANGPT2O15123 496 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 TROVE2P10155 538 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 CCNA2P20248 432 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 IST1P53990 364 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 RBBP4Q09028 425 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 BNIP2Q12982 314 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 EXOC3L2Q2M3D2 409 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 TMEM201Q5SNT2 666 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 ANKRD34AQ69YU3 496 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 SPNS3Q6ZMD2 512 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 Q6ZT83 130 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 CXorf67Q86X51 503 aaPredicted RBP13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 ZIC4Q8N9L1 334 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 HIPK4Q8NE63 616 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 GPR32P1Q8NGA4 272 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
RPUSD1-204ENST00000563560 C12orf10Q9HB07 376 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms