RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MRPL40Q9NQ50 206 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 ZCCHC3Q9NUD5 404 aaKnown RBP4.16□□□□□ -1.74
LINC00254-201ENST00000563416 IL17CQ9P0M4 197 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 CD84Q9UIB8 345 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 STUB1Q9UNE7 303 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 SLC17A4Q9Y2C5 497 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 MMP24Q9Y5R2 645 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 EPG5Q9HCE0 2579 aa4.16□□□□□ -1.74
LINC00254-201ENST00000563416 LAMA5O15230 3695 aa4.15□□□□□ -1.74
LINC00254-201ENST00000563416 SPTBP11277 2137 aa4.15□□□□□ -1.74
LINC00254-201ENST00000563416 TMEM129A0AVI4 362 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 MSGN1A6NI15 193 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ERI2A8K979 691 aaKnown RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GPR89AB7ZAQ6 455 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TMEM150CB9EJG8 249 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 F8WDY8 70 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 CHUKO15111 745 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PSMD3O43242 534 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SNX3O60493 162 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GLRA3O75311 464 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 OR6B1O95007 311 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 AGTP01019 485 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TNFP01375 233 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GP1BAP07359 652 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GPR89BP0CG08 455 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 NCF1P14598 390 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 UGT1A6P19224 532 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 MSNP26038 577 aaKnown RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 CSTF2P33240 577 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SPAM1P38567 509 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 NKX2-1P43699 371 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 HNRNPFP52597 415 aaKnown RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF140P52738 457 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 CACNG1Q06432 222 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 KLC1Q07866 573 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF415Q09FC8 603 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 DNAJC3Q13217 504 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PRPSAP1Q14558 356 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ELOCQ15369 112 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TAF1AQ15573 450 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 RBBP7Q16576 425 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PYCR3Q53H96 274 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SLC35D3Q5M8T2 416 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 AGAP6Q5VW22 663 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SLC25A24Q6NUK1 477 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 IRGCQ6NXR0 463 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 C4orf22Q6V702 233 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 RGS9BPQ6ZS82 235 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GLT6D1Q7Z4J2 308 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GPR141Q7Z602 305 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ADAMTSL2Q86TH1 951 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 C17orf82Q86X59 251 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 HOGA1Q86XE5 327 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GKN2Q86XP6 184 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TRAM1L1Q8N609 369 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PRELID2Q8N945 189 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TMEM185AQ8NFB2 350 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 BRSK1Q8TDC3 778 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 ACTRT1Q8TDG2 376 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 BLOC1S5Q8TDH9 187 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 LMX1AQ8TE12 382 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 C1orf54Q8WWF1 131 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 GLYATL1Q969I3 302 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 LRRC45Q96CN5 670 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SSX3Q99909 188 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 TBL1YQ9BQ87 522 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 Q9H8V8 135 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 LRRC40Q9H9A6 602 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 IL26Q9NPH9 171 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 HOMER3Q9NSC5 361 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SMOXQ9NWM0 555 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PAK5Q9P286 719 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 C19orf25Q9UFG5 118 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PYCARDQ9ULZ3 195 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 SNX12Q9UMY4 172 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 NEUROG3Q9Y4Z2 214 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PCYT1BQ9Y5K3 369 aaPredicted RBP4.15□□□□□ -1.75
LINC00254-201ENST00000563416 PKD1L2Q7Z442 2459 aa4.15□□□□□ -1.75
LINC00254-201ENST00000563416 LOC400499M0QZD8 3231 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CACNA1BQ00975 2339 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PTPRQQ9UMZ3 2332 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TRBV5-4A0A0C4DH59 114 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GLYATL1P3A0A0U1RQE8 302 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 H0YIG0 161 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PGRMC1O00264 195 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 INPP4BO15327 924 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 KIF5CO60282 957 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CDK2AP2O75956 126 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 DIRAS3O95661 229 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 PTBP3O95758 552 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 GAS8O95995 478 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 AK1P00568 194 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 KRT8P05787 483 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 ZSCAN5DPP0CG00 497 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CTSEP14091 401 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 CPA3P15088 417 aa4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TCP1P17987 556 aaKnown RBP4.14□□□□□ -1.75
LINC00254-201ENST00000563416 TPSB2P20231 275 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms