RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 ELSPBP1Q96BH3 223 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 BRD7Q9NPI1 651 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 MKKSQ9NPJ1 570 aaPredicted RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 TMEM74BQ9NUR3 256 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 DNAJB12Q9NXW2 375 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 USP36Q9P275 1121 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 SLC23A1Q9UHI7 598 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 FBXL4Q9UKA2 621 aa12.05□□□□□ -0.48
USB1-207ENST00000563149 PCDHGA9Q9Y5G4 932 aaKnown RBP12.05□□□□□ -0.48
USB1-207ENST00000563149 SCN3AQ9NY46 2000 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 A0A1B0GVC2 190 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 LINC00862A6NCI5 91 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 OR6C74A6NCV1 312 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 TRABD2BA6NFA1 517 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 ZNF860A6NHJ4 632 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 A6NIN4 97 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 PRAF2O60831 178 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 CBX7O95931 251 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 TFP02787 698 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 CD3GP09693 182 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 SNRPBP14678 240 aaKnown RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 GIFP27352 417 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 GDI1P31150 447 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 DIO1P49895 249 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 SEC13P55735 322 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 PPP2CBP62714 309 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 PPP2CAP67775 309 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 DGCR2P98153 550 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 CRYZQ08257 329 aaKnown RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 SNTB2Q13425 540 aaKnown RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 IL10RAQ13651 578 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 KLF9Q13886 244 aaPredicted RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 PON3Q15166 354 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 ZNF141Q15928 474 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 TMEM196Q5HYL7 178 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 DTX3Q8N9I9 347 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 ZNF527Q8NB42 609 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 RPLP0P6Q8NHW5 317 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 RPS4Y2Q8TD47 263 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 SNX33Q8WV41 574 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 FAM3CQ92520 227 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 ANKRD9Q96BM1 317 aaPredicted RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 SGTBQ96EQ0 304 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 NECTIN4Q96NY8 510 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 GSDMCQ9BYG8 508 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 RPS6KB2Q9UBS0 482 aa12.04□□□□□ -0.48
USB1-207ENST00000563149 MRPS2Q9Y399 296 aaKnown RBP12.04□□□□□ -0.48
USB1-207ENST00000563149 PDE4DIPQ5VU43 2346 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 TRBV2A0A0J9YWF9 115 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 A0A0J9YY10 115 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 ARPC3O15145 178 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 SULT1B1O43704 296 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 SNAPC5O75971 98 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 RAF1P04049 648 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 GYPBP06028 91 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
USB1-207ENST00000563149 EDNRAP25101 427 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 RPS11P62280 158 aaKnown RBP eCLIP12.03□□□□□ -0.48
USB1-207ENST00000563149 FGFBP1Q14512 234 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 TEX261Q6UWH6 196 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 RD3Q7Z3Z2 195 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 SDR9C7Q8NEX9 313 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 OR52R1Q8NGF1 315 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 OR10G6Q8NH81 332 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 TSACCQ96A04 125 aaPredicted RBP12.03□□□□□ -0.48
USB1-207ENST00000563149 ZMYND19Q96E35 227 aaPredicted RBP12.03□□□□□ -0.48
USB1-207ENST00000563149 ZFP3Q96NJ6 502 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 PTCHD1Q96NR3 888 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 CITED4Q96RK1 184 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 U3KQ87 197 aa12.03□□□□□ -0.48
USB1-207ENST00000563149 TRBV23OR9-2A0A075B6M9 112 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 EFCAB7A8K855 629 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 LEUTXA8MZ59 168 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 SLC22A5O76082 557 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 NGFRP08138 427 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 EMDP50402 254 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 AP3S2P59780 193 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 YPEL5P62699 121 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 MRPS10P82664 201 aaKnown RBP12.02□□□□□ -0.48
USB1-207ENST00000563149 PSG6Q00889 435 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 GPR18Q14330 331 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 PRSS41Q7RTY9 318 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 ZNF614Q8N883 585 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 OR4K13Q8NH42 304 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 CCL4L1Q8NHW4 92 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 DOK4Q8TEW6 326 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 BMFQ96LC9 184 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.48
USB1-207ENST00000563149 POT1Q9NUX5 634 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms