RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DCDC2BA2VCK2 349 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 ZNF208O43345 1280 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
COMMD4-205ENST00000562310 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.33
COMMD4-205ENST00000562310 NDUFB2O95178 105 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 AHSA1O95433 338 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 MT-ATP6P00846 226 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 GABRB1P18505 474 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 CLN3Q13286 438 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 ZNF74Q16587 644 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.96□□□□□ -0.33
COMMD4-205ENST00000562310 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 SLC25A30Q5SVS4 291 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 MEDAGQ5VYS4 303 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 OR5M10Q6IEU7 315 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 ISLR2Q6UXK2 745 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 IQCF1Q8N6M8 205 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 WDSUB1Q8N9V3 476 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 PSD4Q8NDX1 1056 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 APH1BQ8WW43 257 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-205ENST00000562310 PLEKHA8Q96JA3 519 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 SAMD8Q96LT4 415 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.33
COMMD4-205ENST00000562310 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 CHRNA9Q9UGM1 479 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 ZNF229Q9UJW7 825 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 POLHQ9Y253 713 aa12.96□□□□□ -0.33
COMMD4-205ENST00000562310 DCHS1Q96JQ0 3298 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 PCNX3Q9H6A9 2034 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 TMEM72A0PK05 275 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ARGFXA6NJG6 315 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 TRIM64CA6NLI5 447 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 M0R3G1 203 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FAM20BO75063 409 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 PTP4A3O75365 173 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 CH25HO95992 272 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 CLPTM1O96005 669 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FUT1P19526 365 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FKBP2P26885 142 aaKnown RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ADH6P28332 368 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FMO3P31513 532 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 PRPS1P60891 318 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 RPS4XP62701 263 aaKnown RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 OC90Q02509 493 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 EGR4Q05215 589 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FOXF1Q12946 379 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 MFSD13AQ14CX5 517 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 SNAPC1Q16533 368 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 OCLNQ16625 522 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 CLEC12AQ5QGZ9 265 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ZNF773Q6PK81 442 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ADGRG3Q86Y34 549 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 LNX2Q8N448 690 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 BPIFB6Q8NFQ5 453 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 OR1J4Q8NGS1 313 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
COMMD4-205ENST00000562310 ZNF524Q96C55 264 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 RNF32Q9H0A6 362 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 UBQLN3Q9H347 655 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 MCCC2Q9HCC0 563 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 NANSQ9NR45 359 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 SERINC1Q9NRX5 453 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 TVP23BQ9NYZ1 205 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 VDAC3Q9Y277 283 aa12.95□□□□□ -0.34
COMMD4-205ENST00000562310 SPEGQ15772 3267 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 TRAV27A0A087WT01 109 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 B4DXG7 233 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 BHLHE40O14503 412 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 OR2T1O43869 369 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 NPIPB7O75200 414 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 TRIM3O75382 744 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-205ENST00000562310 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
COMMD4-205ENST00000562310 HIST1H2ABP04908 130 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 ZNF17P17021 662 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 EEF1B2P24534 225 aaKnown RBP12.94□□□□□ -0.34
COMMD4-205ENST00000562310 DSCR4P56555 118 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-205ENST00000562310 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 CDC20Q12834 499 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 FOXC1Q12948 553 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 GLYR1Q49A26 553 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-205ENST00000562310 FAM69AQ5T7M9 428 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 AGAP7PQ5VUJ5 663 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 C1orf140Q5VVS0 124 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 ACSM5Q6NUN0 579 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 C3orf33Q6P1S2 294 aa12.94□□□□□ -0.34
COMMD4-205ENST00000562310 ARHGAP11AQ6P4F7 1023 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms