RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 CMIPQ8IY22 773 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 OR52E4Q8NGH9 312 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC25A43Q8WUT9 341 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 KISS1RQ969F8 398 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 ZHX1-C8orf76Q96EF9 292 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 PERPQ96FX8 193 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 TACO1Q9BSH4 297 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 C1QTNF6Q9BXI9 259 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 GSX1Q9H4S2 264 aaPredicted RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 PIF1Q9H611 641 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC52A3Q9NQ40 469 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 ADPRHL2Q9NX46 363 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CALML5Q9NZT1 146 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM181Q9P2C4 612 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 GPR52Q9Y2T5 361 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 NOSIPQ9Y314 301 aaKnown RBP8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 CADP27708 2225 aa8.39□□□□□ -1.07
NSMCE1-203ENST00000562039 DSPPQ9NZW4 1301 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 A0A0G2JPF8 293 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF716A6NP11 495 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 HNRNPCL2B2RXH8 293 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 HNRNPCL3B7ZW38 293 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 TPST1O60507 370 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 HNRNPCL1O60812 293 aaKnown RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 EDF1O60869 148 aaKnown RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 RAD51DO75771 328 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 PGM3O95394 542 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 PMS2P2O95744 297 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 HNRNPCL4P0DMR1 293 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 CDH2P19022 906 aaPredicted RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 PSMB1P20618 241 aaKnown RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 IDUAP35475 653 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 MTPNP58546 118 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 COPZ1P61923 177 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ADAM8P78325 824 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ACKR1Q16570 336 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 BEX5Q5H9J7 111 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 OTUD3Q5T2D3 398 aaPredicted RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ABLIM2Q6H8Q1 611 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 CASP12Q6UXS9 341 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 Q71RC1 249 aaPredicted RBP8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 DHDDSQ86SQ9 333 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 TGIF2LYQ8IUE0 185 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 KDM8Q8N371 416 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM99Q8N816 258 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 STEAP2Q8NFT2 490 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 OR52N5Q8NH56 324 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 APH1AQ96BI3 265 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC25A36Q96CQ1 311 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 DDIT4LQ96D03 193 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 CCL19Q99731 98 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 SMR3AQ99954 134 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 WFDC6Q9BQY6 131 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 SPATA9Q9BWV2 254 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM120AQ9BXJ8 343 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 VIPAS39Q9H9C1 493 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 BCO1Q9HAY6 547 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 A4GALTQ9NPC4 353 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 FANCFQ9NPI8 374 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF446Q9NWS9 450 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF232Q9UNY5 417 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 HDGFL3Q9Y3E1 203 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 MTORP42345 2549 aa8.38□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF469Q96JG9 3925 aaPredicted RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 MAP1AP78559 2803 aaPredicted RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 A0A1W2PP18 115 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 CIB4A0PJX0 185 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 CCT8L1PA6NM43 557 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF724A8MTY0 619 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 SMPD2O60906 423 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 OPN1SWP03999 348 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ARAFP10398 606 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 UQCRBP14927 111 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 MAGEA8P43361 318 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 HTR3AP46098 478 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF83P51522 516 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 NR1H2P55055 460 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC35A1P78382 337 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 NKX6-1P78426 367 aaPredicted RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 TXNL4AP83876 142 aaKnown RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 CDK6Q00534 326 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 LGALS3BPQ08380 585 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 FAPQ12884 760 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ITGADQ13349 1161 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 NFYCQ13952 458 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 SCARB2Q14108 478 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 LRIF1Q5T3J3 769 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 WBP2NLQ6ICG8 309 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ADAM5Q6NVV9 412 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 GPAT4Q86UL3 456 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 RETREG3Q86VR2 466 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 KRTAP1-3Q8IUG1 177 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF440Q8IYI8 595 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 SMYD1Q8NB12 490 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 KBTBD8Q8NFY9 601 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 BBS10Q8TAM1 723 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 AKAP1Q92667 903 aaKnown RBP eCLIP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms