RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 KLF13Q9Y2Y9 288 aaPredicted RBP9.35□□□□□ -0.91
USP3-219ENST00000561326 MRPS18CQ9Y3D5 142 aaKnown RBP9.35□□□□□ -0.91
USP3-219ENST00000561326 CDH10Q9Y6N8 788 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 AKAP13Q12802 2813 aa9.35□□□□□ -0.91
USP3-219ENST00000561326 DNAJC13O75165 2243 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 E9PQ18 207 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 KLRC4-KLRK1H3BQV0 150 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ETV2O00321 342 aaPredicted RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 EFSO43281 561 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ZNF208O43345 1280 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 PTP4A3O75365 173 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 TRIM3O75382 744 aaPredicted RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 OR7A10O76100 309 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 AHSA1O95433 338 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 NTN1O95631 604 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 LYNP07948 512 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 TFPIP10646 304 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 HK1P19367 917 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 PTNP21246 168 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 MST1P26927 711 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ID4P47928 161 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CLK1P49759 484 aaKnown RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 PRPS1P60891 318 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ARG2P78540 354 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CD47Q08722 323 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SRSF6Q13247 344 aaKnown RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 CDK5R2Q13319 367 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 TOMM20Q15388 145 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 C6orf141Q5SZD1 244 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 TMEM236Q5W0B7 351 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SPINK14Q6IE38 97 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SLC25A25Q6KCM7 469 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CCDC81Q6ZN84 652 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ZNF620Q6ZNG0 422 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 MAMDC2Q7Z304 686 aaPredicted RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 MEX3DQ86XN8 651 aaKnown RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 P3H2Q8IVL5 708 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 OR2T33Q8NG76 320 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 OR8J1Q8NGP2 316 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 OR6S1Q8NH40 331 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 FANK1Q8TC84 345 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SLC25A43Q8WUT9 341 aaPredicted RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 LIPHQ8WWY8 451 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 HDAC2Q92769 488 aaKnown RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SAMD8Q96LT4 415 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 C5orf34Q96MH7 638 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 TSSK6Q9BXA6 273 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.34□□□□□ -0.915e-7■■□□□ 12.5
USP3-219ENST00000561326 ADNPQ9H2P0 1102 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
USP3-219ENST00000561326 EGLN3Q9H6Z9 239 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CLN6Q9NWW5 311 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SCN3BQ9NY72 215 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 DKK4Q9UBT3 224 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 B4GALT7Q9UBV7 327 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 CHRNA9Q9UGM1 479 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SCOCQ9UIL1 159 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 ZNF229Q9UJW7 825 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 FBXL2Q9UKC9 423 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 SIGLEC7Q9Y286 467 aa9.34□□□□□ -0.91
USP3-219ENST00000561326 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 IGKV1D-42A0A075B6H8 117 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TMEM72A0PK05 275 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 SNTNA6NMZ2 147 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 C17orf51A8MQB3 221 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 G3V3Y1 287 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 M0R3G1 203 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 CDC42EP2O14613 210 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 NEURL1O76050 574 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 NDUFB2O95178 105 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TP53P04637 393 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 SP1P08047 785 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 SLC6A6P31641 620 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 RPS5P46782 204 aaKnown RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 DNASE1L1P49184 302 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 CXCR4P61073 352 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 MYBPC1Q00872 1141 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 TEKQ02763 1124 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 MAD2L1BPQ15013 274 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 INPP5JQ15735 1006 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 SNAPC1Q16533 368 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 ZNF74Q16587 644 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 FAM69AQ5T7M9 428 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 C1orf140Q5VVS0 124 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 C12orf73Q69YU5 71 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 C3orf33Q6P1S2 294 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 GTPBP8Q8N3Z3 284 aaPredicted RBP9.33□□□□□ -0.92
USP3-219ENST00000561326 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 OR2M7Q8NG81 312 aa9.33□□□□□ -0.92
USP3-219ENST00000561326 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms