RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRAP1Q12931 704 aaKnown RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 PMS2P3Q13401 168 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 CEACAM7Q14002 265 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 TRIM25Q14258 630 aaKnown RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 TRAM2Q15035 370 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ZNF730Q6ZMV8 503 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 CBLL1Q75N03 491 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 MAMDC2Q7Z304 686 aaPredicted RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 ABHD12BQ7Z5M8 362 aaPredicted RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 GPAT4Q86UL3 456 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ADGRG3Q86Y34 549 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 POC1BQ8TC44 478 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ADAMTS16Q8TE57 1224 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 HSH2DQ96JZ2 352 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ARHGDIGQ99819 225 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ADAM19Q9H013 955 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 MCCC2Q9HCC0 563 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 ACTR3BQ9P1U1 418 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 UPB1Q9UBR1 384 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 PACSIN3Q9UKS6 424 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 SLC7A7Q9UM01 511 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 AURKCQ9UQB9 309 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 CORINQ9Y5Q5 1042 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 V9GYQ6 96 aa9.63□□□□□ -0.87
TPM1-229ENST00000561242 TNRC6AQ8NDV7 1962 aaKnown RBP9.63□□□□□ -0.87
TPM1-229ENST00000561242 A0A0J9YW62 118 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 ZNF726A6NNF4 738 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 TPST2O60704 377 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 SEMA7AO75326 666 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 MRPL33O75394 65 aaKnown RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 PDE5AO76074 875 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 IL18BPO95998 194 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 YES1P07947 543 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 ZNF43P17038 809 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 FPR1P21462 350 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 AHCYP23526 432 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 HOXC12P31275 282 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 UQCRC1P31930 480 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 RPS5P46782 204 aaKnown RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 SUCLG1P53597 346 aaKnown RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 CDH12P55289 794 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 MYBPHQ13203 477 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 FLOT2Q14254 428 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 MAPK11Q15759 364 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 NRF1Q16656 503 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 TMEM44Q2T9K0 475 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 OTUD3Q5T2D3 398 aaPredicted RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 FAM69AQ5T7M9 428 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 CYP2R1Q6VVX0 501 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 FAM214BQ7L5A3 538 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 GALNT5Q7Z7M9 940 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 CCDC71Q8IV32 467 aaPredicted RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 OR6T1Q8NGN1 323 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 FNDC9Q8TBE3 224 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 ROBO4Q8WZ75 1007 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 C3orf49Q96BT1 292 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 NTNG2Q96CW9 530 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 SEPHS2Q99611 448 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 SLC19A3Q9BZV2 496 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 GP6Q9HCN6 339 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 NANSQ9NR45 359 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 DCAF13Q9NV06 445 aaKnown RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 TAS2R1Q9NYW7 299 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 RIMS3Q9UJD0 308 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 RNF6Q9Y252 685 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 RASD1Q9Y272 281 aa9.62□□□□□ -0.87
TPM1-229ENST00000561242 NOSIPQ9Y314 301 aaKnown RBP9.62□□□□□ -0.87
TPM1-229ENST00000561242 A0A087WUJ7 227 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 MBD3L4A6NDZ8 208 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 MBD3L3A6NE82 208 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 MBD3L5A6NJ08 208 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 ARPC2O15144 300 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 MT-ATP6P00846 226 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 H1F0P07305 194 aaKnown RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 SAGP10523 405 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 PRG2P13727 222 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 COX6B1P14854 86 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 RHCEP18577 417 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 CPOXP36551 454 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 RBM34P42696 430 aaKnown RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 GUCA1AP43080 201 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 YAP1P46937 504 aaKnown RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 SPIBQ01892 262 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 BNIP1Q12981 228 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 GLIPR1L2Q4G1C9 344 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 DCST1Q5T197 706 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 C1orf146Q5VVC0 180 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 BEND4Q6ZU67 534 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 HDDC2Q7Z4H3 204 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 FGD2Q7Z6J4 655 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 ATG4DQ86TL0 474 aaPredicted RBP9.61□□□□□ -0.87
TPM1-229ENST00000561242 GCNT2Q8N0V5 402 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 C10orf111Q8N326 155 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 LILRB4Q8NHJ6 448 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 MFSD8Q8NHS3 518 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 MBD3L2Q8NHZ7 208 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms