RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CARM1Q86X55 608 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 CADM2Q8N3J6 435 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 RNF148Q8N7C7 305 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 LILRB4Q8NHJ6 448 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 ASB5Q8WWX0 329 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 SMPDL3BQ92485 455 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 DDIT4LQ96D03 193 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC47A1Q96FL8 570 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 ARL5BQ96KC2 179 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 BTBD10Q9BSF8 475 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 PRR14Q9BWN1 585 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 TMEM185BQ9H7F4 350 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 GLRX2Q9NS18 164 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 COQ3Q9NZJ6 369 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 ACTR3BQ9P1U1 418 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 RPS6KB2Q9UBS0 482 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 Q9UFV3 132 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 EGFL7Q9UHF1 273 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 MAGEL2Q9UJ55 1249 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 RPS6KA6Q9UK32 745 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 RNF6Q9Y252 685 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 SH3GLB1Q9Y371 365 aa8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
RABGGTA-221ENST00000561055 A0A1W2PNR3 127 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 TMEM72A0PK05 275 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 TRAPPC13A5PLN9 417 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SULT2B1O00204 365 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ARPC2O15144 300 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 CHP2O43745 196 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 GMNNO75496 209 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 LYPD3O95274 346 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SERPINA1P01009 418 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 OPN1LWP04000 364 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 RNF224P0DH78 156 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 THRBP10828 461 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 NCK1P16333 377 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC7A1P30825 629 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 EIF1AXP47813 144 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 DIO1P49895 249 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 RASSF2P50749 326 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 CDH12P55289 794 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 NCALDP61601 193 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 CSNK2A1P68400 391 aaPredicted RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 EGR4Q05215 589 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 MYBPHQ13203 477 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 PON3Q15166 354 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SGCBQ16585 318 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ZNF239Q16600 458 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 DNAL1Q4LDG9 190 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 IFI44LQ53G44 452 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 NCCRP1Q6ZVX7 275 aaPredicted RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 TSPYL5Q86VY4 417 aaPredicted RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 RBM45Q8IUH3 476 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC43A2Q8N370 569 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 C9orf106Q8NAJ2 232 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 NAXEQ8NCW5 288 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 FAM156AQ8NDB6 213 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 OR6S1Q8NH40 331 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 FNDC9Q8TBE3 224 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ADAMTS16Q8TE57 1224 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 GEMIN6Q8WXD5 167 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 POP5Q969H6 163 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 FAM162AQ96A26 154 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ZNF845Q96IR2 970 aaPredicted RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 TPD52L3Q96J77 140 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 MPP4Q96JB8 637 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 TMEM43Q9BTV4 400 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ZNF426Q9BUY5 554 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SRXN1Q9BYN0 137 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 PACSIN3Q9UKS6 424 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 MCTS1Q9ULC4 181 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SAMD4AQ9UPU9 718 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SNX13Q9Y5W8 968 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 SPTAN1Q13813 2472 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 ALPK2Q86TB3 2170 aa8.62□□□□□ -1.03
RABGGTA-221ENST00000561055 PTPN13Q12923 2485 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ZC3H12DA2A288 527 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 GYG2O15488 501 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR2T1O43869 369 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 EIF1BO60739 113 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 AQP8O94778 261 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR5F1O95221 314 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 SYNGR4O95473 234 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 IGF2P01344 180 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 THY1P04216 161 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 SEMG1P04279 462 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TMIGD3P0DMS9 266 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TFPIP10646 304 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 IMPDH2P12268 514 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TCN1P20061 433 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 CTSSP25774 331 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OPRM1P35372 400 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 MSX2P35548 267 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR1E2P47887 323 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 PCYT1AP49585 367 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms