RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TUBBP07437 444 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 MPC1LP0DKB6 136 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 COX7A2P14406 83 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 GGT1P19440 569 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 COX5AP20674 150 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 S1PR1P21453 382 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 TMED10P49755 219 aaKnown RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 PPOXP50336 477 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 DSCR4P56555 118 aaPredicted RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 STXBP1P61764 594 aaKnown RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 REEP5Q00765 189 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 MYBPC1Q00872 1141 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 RASGEF1BQ0VAM2 473 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 BIKQ13323 160 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 CUL1Q13616 776 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 TFDP2Q14188 446 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 CSHL1Q14406 222 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 RBBP5Q15291 538 aaKnown RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 EFNB3Q15768 340 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ADIPOQQ15848 244 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 C2orf68Q2NKX9 166 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ZNF585BQ52M93 769 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 DEFB121Q5J5C9 76 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ELFN2Q5R3F8 820 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 RNF220Q5VTB9 566 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ANKRD22Q5VYY1 191 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 FAM90A2PQ658T7 463 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ZNF470Q6ECI4 717 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ACSM5Q6NUN0 579 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 Q6ZT83 130 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 SLC46A3Q7Z3Q1 461 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 CCDC50Q8IVM0 306 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 TUSC5Q8IXB3 177 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ST13P4Q8IZP2 240 aaPredicted RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 WDR31Q8NA23 367 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 BBOF1Q8ND07 529 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 C7orf57Q8NEG2 295 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 OR2L5Q8NG80 312 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 OR2M3Q8NG83 312 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 OR52N5Q8NH56 324 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 OR10D3Q8NH80 312 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ABHD3Q8WU67 409 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 SLC5A11Q8WWX8 675 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 LPGAT1Q92604 370 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 P3H4Q92791 437 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 RIT1Q92963 219 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 HAUS1Q96CS2 278 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 OMA1Q96E52 524 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 ERGIC2Q96RQ1 377 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 HAUS8Q9BT25 410 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 DSN1Q9H410 356 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 LYRM4Q9HD34 91 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 PLEK2Q9NYT0 353 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 KLRF1Q9NZS2 232 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 DKKL1Q9UK85 242 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 FBXO9Q9UK97 447 aaPredicted RBP3.17□□□□□ -1.9
HERC1-211ENST00000560983 UTS2RQ9UKP6 389 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 NUP50Q9UKX7 468 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 MYO6Q9UM54 1294 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 CRYL1Q9Y2S2 319 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 U3KQK5 164 aa3.17□□□□□ -1.9
HERC1-211ENST00000560983 PLCE1Q9P212 2302 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 ALMS1Q8TCU4 4167 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 UQCRHLA0A096LP55 91 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 A0A0J9YW62 118 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 TMEM272A0A1B0GTI8 110 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 LRRC53A6NM62 1247 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 ATP6V1G2-DDX39BF2Z307 99 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 H0YL77 283 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 M0R1B8 84 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 CXCL13O43927 109 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 PIP5K1CO60331 668 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 GPR75O95800 540 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 OPN1LWP04000 364 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 YES1P07947 543 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 NGFRP08138 427 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 CT62P0C5K7 136 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 OR4A8P0C604 315 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 SAGP10523 405 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 ANPEPP15144 967 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 MATN1P21941 496 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 GPX3P22352 226 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 ATP5A1P25705 553 aaKnown RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 CTNNA2P26232 953 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 GRIA1P42261 906 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 OR3A2P47893 321 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 TMEM33P57088 247 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 PRAMEP78395 509 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 PLIN5Q00G26 463 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 RCN2Q14257 317 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 PARP6Q2NL67 630 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 GLYR1Q49A26 553 aaPredicted RBP3.16□□□□□ -1.9
HERC1-211ENST00000560983 CCDC181Q5TID7 509 aa3.16□□□□□ -1.9
HERC1-211ENST00000560983 LRRC38Q5VT99 294 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms