RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OXSMQ9NWU1 459 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 PYCARDQ9ULZ3 195 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 SLC35A3Q9Y2D2 325 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 PCDHB14Q9Y5E9 798 aa16.14■□□□□ 0.17
TPM1-226ENST00000560959 AZIN1O14977 448 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 GLRA3O75311 464 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 VENTXO95231 258 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 CHEK2O96017 543 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 CRYAAP02489 173 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 PROCP04070 461 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ERCC1P07992 297 aaPredicted RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 OR4A8P0C604 315 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 UBTFL6P0CB48 400 aaPredicted RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 ECHS1P30084 290 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 PGM1P36871 562 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 MAP2K6P52564 334 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ETF1P62495 437 aaKnown RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 SCGB2A2Q13296 93 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 SLC17A1Q14916 467 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 GPR68Q15743 365 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ADIPOQQ15848 244 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ARHGAP11BQ3KRB8 267 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 C9orf135Q5VTT2 229 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ABHD12BQ7Z5M8 362 aaPredicted RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 ADGRG3Q86Y34 549 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ZNF786Q8N393 782 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 POMGNT2Q8NAT1 580 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 IFT81Q8WYA0 676 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 PMM1Q92871 262 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 TMEM45BQ96B21 275 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 COQ8BQ96D53 544 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 ZNF317Q96PQ6 595 aaPredicted RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 NAA11Q9BSU3 229 aaPredicted RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 SAP130Q9H0E3 1048 aa16.13■□□□□ 0.17
TPM1-226ENST00000560959 MOV10Q9HCE1 1003 aaKnown RBP16.13■□□□□ 0.17
TPM1-226ENST00000560959 IGHV1-18A0A0C4DH31 117 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 VSTM5A8MXK1 200 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 FCMRO60667 390 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
TPM1-226ENST00000560959 LINC00032P0C843 101 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 DAOP14920 347 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 APEX1P27695 318 aaKnown RBP16.12■□□□□ 0.17
TPM1-226ENST00000560959 MAPK1P28482 360 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 HTR3AP46098 478 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 KHKP50053 298 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 OR2B6P58173 313 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 SLC35A1P78382 337 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 SPATA19Q7Z5L4 167 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 FAM169BQ8N8A8 192 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 OR4F15Q8NGB8 312 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 OR5D16Q8NGK9 328 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 ZNF563Q8TA94 476 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 PRPF18Q99633 342 aaKnown RBP16.12■□□□□ 0.17
TPM1-226ENST00000560959 ZNF350Q9GZX5 532 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 OCEL1Q9H607 264 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 CRNNQ9UBG3 495 aaPredicted RBP16.12■□□□□ 0.17
TPM1-226ENST00000560959 PCDHGB4Q9UN71 923 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 DNAJC15Q9Y5T4 150 aa16.12■□□□□ 0.17
TPM1-226ENST00000560959 DYSFO75923 2080 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 TMEM89A2RUT3 159 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 ZNF208O43345 1280 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 C6orf47O95873 294 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 FGF4P08620 206 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 IL2RGP31785 369 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 RIN1Q13671 783 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 GALNTL6Q49A17 601 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 LIPMQ5VYY2 423 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 NUP37Q8NFH4 326 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 MZB1Q8WU39 189 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 SF3B5Q9BWJ5 86 aaKnown RBP16.11■□□□□ 0.17
TPM1-226ENST00000560959 EXOSC3Q9NQT5 275 aaKnown RBP16.11■□□□□ 0.17
TPM1-226ENST00000560959 POLE3Q9NRF9 147 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 TMEM45AQ9NWC5 275 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 PSMC3IPQ9P2W1 217 aaPredicted RBP16.11■□□□□ 0.17
TPM1-226ENST00000560959 MKLN1Q9UL63 735 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 MGAM2Q2M2H8 2515 aa16.11■□□□□ 0.17
TPM1-226ENST00000560959 CENPVL1A0A0U1RR11 272 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 B4DSR2 109 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 KLF11O14901 512 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 KCNAB3O43448 404 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 PLIN3O60664 434 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
TPM1-226ENST00000560959 CPA3P15088 417 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 MATN1P21941 496 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 SLC1A3P43003 542 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 CCT5P48643 541 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 KANK2Q63ZY3 851 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 ANKRD16Q6P6B7 361 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 PAQR6Q6TCH4 344 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 TRMT10CQ7L0Y3 403 aaKnown RBP16.1■□□□□ 0.17
TPM1-226ENST00000560959 C3orf56Q8N813 242 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 MAGEE2Q8TD90 523 aaPredicted RBP16.1■□□□□ 0.17
TPM1-226ENST00000560959 FAM216AQ8WUB2 273 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 DDIT4LQ96D03 193 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 DOK1Q99704 481 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 OR11A1Q9GZK7 315 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 ZNF442Q9H7R0 627 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 EXD2Q9NVH0 621 aa16.1■□□□□ 0.17
TPM1-226ENST00000560959 ARPC4-TTLL3A0A0A6YYG9 625 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 AGR2O95994 175 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms