RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CADM2Q8N3J6 435 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 LSMEM1Q8N8F7 131 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 OR6K3Q8NGY3 331 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 TAMM41Q96BW9 452 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 PRR14Q9BWN1 585 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 BCO1Q9HAY6 547 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 GP6Q9HCN6 339 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 CMTM6Q9NX76 183 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 GMPR2Q9P2T1 348 aaKnown RBP13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
SNRPA1-213ENST00000560856 TMEM229AB2RXF0 380 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 NPIPB7O75200 414 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 PRKD3O94806 890 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 TACC2O95359 2948 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 LGI1O95970 557 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 OPN1SWP03999 348 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 FESP07332 822 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 KCNJ5P48544 419 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 COPZ1P61923 177 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 CSNK2A1P68400 391 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 SORDQ00796 357 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 FAM27E3Q08E93 113 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 BNIP2Q12982 314 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 RNPS1Q15287 305 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 NUFIP2Q7Z417 695 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 GDF7Q7Z4P5 450 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 PATL1Q86TB9 770 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 TUSC5Q8IXB3 177 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 SLC15A3Q8IY34 581 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 SMYD1Q8NB12 490 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 BHLHE22Q8NFJ8 381 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 LRRC46Q96FV0 321 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 REXO5Q96IC2 774 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 ARHGDIGQ99819 225 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 ECSITQ9BQ95 431 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 PSD2Q9BQI7 771 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 POTEKPQ9BYX7 375 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 CRIM1Q9NZV1 1036 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 TMEM181Q9P2C4 612 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 KLHL13Q9P2N7 655 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 PROCRQ9UNN8 238 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 EMC9Q9Y3B6 208 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 LRBAP50851 2863 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 POLQO75417 2590 aa13.6□□□□□ -0.23
SNRPA1-213ENST00000560856 A0A1B0GWA3 101 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 CCT8L1PA6NM43 557 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 AIM2O14862 343 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 DNPH1O43598 174 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 RAMP1O60894 148 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 PLGP00747 810 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 CXCR1P25024 350 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 SSTR2P30874 369 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 CCKARP32238 428 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 PEX19P40855 299 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 KIR2DL3P43628 341 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 CTBP2P56545 445 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 EGR4Q05215 589 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 VEZF1Q14119 521 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 NRF1Q16656 503 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 C6orf89Q6UWU4 347 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 HACD2Q6Y1H2 254 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 OR4D11Q8NGI4 311 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 PRR14LQ5THK1 2151 aa13.59□□□□□ -0.23
SNRPA1-213ENST00000560856 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 FAM221AA4D161 298 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 ZNF716A6NP11 495 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 C8BP07358 591 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 YES1P07947 543 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 EDNRAP25101 427 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 PRDX6P30041 224 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 NTF4P34130 210 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 CD79BP40259 229 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 CPA2P48052 419 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 OR2B6P58173 313 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 KRTAP10-9P60411 292 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 TLE4Q04727 773 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 RASGEF1BQ0VAM2 473 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 PDK3Q15120 406 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 NPTX1Q15818 432 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 INTS11Q5TA45 600 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 LINC01560Q8TB33 94 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 STK35Q8TDR2 534 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 FAM222BQ8WU58 562 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 DDIT4LQ96D03 193 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 ZNF300Q96RE9 604 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 TRIM2Q9C040 744 aa13.58□□□□□ -0.24
SNRPA1-213ENST00000560856 EVA1AQ9H8M9 152 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms