RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ASB6Q9NWX5 421 aa12.48□□□□□ -0.41
TPM1-223ENST00000560445 IFT52Q9Y366 437 aa12.48□□□□□ -0.41
TPM1-223ENST00000560445 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
TPM1-223ENST00000560445 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 A0A0G2JPF8 293 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 A0A1W2PP18 115 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 CIB4A0PJX0 185 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 OR5H1A6NKK0 313 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 HNRNPCL2B2RXH8 293 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 HNRNPCL3B7ZW38 293 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 GPIP06744 558 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 HEXAP06865 529 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 CHRM4P08173 479 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 HNRNPCL4P0DMR1 293 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 PPIBP23284 216 aaKnown RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 IDUAP35475 653 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 ATP5J2P56134 94 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 FADDQ13158 208 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 SYPL1Q16563 259 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 MRPL2Q5T653 305 aaKnown RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 RNF220Q5VTB9 566 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 DNAJC14Q6Y2X3 702 aaPredicted RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 C1orf162Q8NEQ5 155 aaPredicted RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 OR52P1PQ8NH57 321 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 LRRC8CQ8TDW0 803 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 CNOT9Q92600 299 aaKnown RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 TEX37Q96LM6 180 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 C7orf26Q96N11 449 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 INPP5KQ9BT40 448 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 TAPBPLQ9BX59 468 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 MOV10Q9HCE1 1003 aaKnown RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 ARGLU1Q9NWB6 273 aaPredicted RBP12.47□□□□□ -0.41
TPM1-223ENST00000560445 TAS2R16Q9NYV7 291 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 TMED7Q9Y3B3 224 aa12.47□□□□□ -0.41
TPM1-223ENST00000560445 NIPBLQ6KC79 2804 aaeCLIP12.46□□□□□ -0.41
TPM1-223ENST00000560445 CDHR4A6H8M9 788 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 OR6C65A6NJZ3 312 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 CCT8L1PA6NM43 557 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 LYZL6O75951 148 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 VAMP5O95183 116 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 GSNP06396 782 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 NCF2P19878 526 aaPredicted RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 TACR3P29371 465 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 CDKN2CP42773 168 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 EPS8Q12929 822 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 WBP2NLQ6ICG8 309 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 PAQR6Q6TCH4 344 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 KLHL24Q6TFL4 600 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 C22orf34Q6ZV56 151 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 ADGRG3Q86Y34 549 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 KRT73Q86Y46 540 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 KRTAP1-3Q8IUG1 177 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 PNPT1Q8TCS8 783 aaKnown RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 ZNF75CPQ92670 426 aaPredicted RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 ZNF300Q96RE9 604 aaPredicted RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 UPB1Q9UBR1 384 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 OSGIN1Q9UJX0 560 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 ING1Q9UK53 422 aaPredicted RBP12.46□□□□□ -0.41
TPM1-223ENST00000560445 USH1CQ9Y6N9 552 aa12.46□□□□□ -0.41
TPM1-223ENST00000560445 DSPPQ9NZW4 1301 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 H7C1Q1 480 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 PGM3O95394 542 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 BCHEP06276 602 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 BMP4P12644 408 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 PTAFRP25105 342 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 IL12AP29459 219 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 MRPL19P49406 292 aaKnown RBP12.45□□□□□ -0.42
TPM1-223ENST00000560445 LTBQ06643 244 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 BSPH1Q075Z2 132 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 NRF1Q16656 503 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 ZNF672Q499Z4 452 aaPredicted RBP12.45□□□□□ -0.42
TPM1-223ENST00000560445 C5orf46Q6UWT4 87 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 CASP12Q6UXS9 341 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 OLIG3Q7RTU3 272 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 SMAP2Q8WU79 429 aaPredicted RBP12.45□□□□□ -0.42
TPM1-223ENST00000560445 SPATA5L1Q9BVQ7 753 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 SPATA9Q9BWV2 254 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 GRIP2Q9C0E4 1043 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 RABEP2Q9H5N1 569 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 DCTN4Q9UJW0 460 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 LAMP3Q9UQV4 416 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 NAV3Q8IVL0 2385 aa12.45□□□□□ -0.42
TPM1-223ENST00000560445 ABCA2Q9BZC7 2435 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms