RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 LEF1Q9UJU2 399 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 TRIM33Q9UPN9 1127 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 HDGFL3Q9Y3E1 203 aa10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 SPIN1Q9Y657 262 aaPredicted RBP10.34□□□□□ -0.75
RABGGTA-216ENST00000560243 CADP27708 2225 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 C5orf58C9J3I9 102 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 FBP2O00757 339 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 TPST1O60507 370 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 VIMP08670 466 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 PPIBP23284 216 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 LOXP28300 417 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 AQP1P29972 269 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 CLK1P49759 484 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 ART1P52961 327 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 MTPNP58546 118 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 CDK6Q00534 326 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 CAPRIN1Q14444 709 aaKnown RBP10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 GLIPR1L2Q4G1C9 344 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 RUNDC3AQ59EK9 446 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 REEP3Q6NUK4 255 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 PAMR1Q6UXH9 720 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 PTOV1Q86YD1 416 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 DPP10Q8N608 796 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 S100PBPQ96BU1 408 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 PIK3IP1Q96FE7 263 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 ACTR6Q9GZN1 396 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 ZNF226Q9NYT6 803 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 TMEM181Q9P2C4 612 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 IFT52Q9Y366 437 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 NDUFAF1Q9Y375 327 aa10.33□□□□□ -0.76
RABGGTA-216ENST00000560243 IGKV3D-15A0A087WSY6 115 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ZNF724A8MTY0 619 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 EVPLLA8MZ36 301 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ANGPT2O15123 496 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ZNF208O43345 1280 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 KLF4O43474 513 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ADAP00813 363 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 IGHV3-9P01782 118 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 TROVE2P10155 538 aaKnown RBP eCLIP10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 UQCRBP14927 111 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ETS2P15036 469 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 PSMB1P20618 241 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 FPR1P21462 350 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 CXCR1P25024 350 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 OR3A2P47893 321 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 H3F3AP84243 136 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 NFYCQ13952 458 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 SCARB2Q14108 478 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 METTL21CQ5VZV1 264 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 WBP2NLQ6ICG8 309 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 WFDC8Q8IUA0 241 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 C3orf49Q96BT1 292 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 DDIT4LQ96D03 193 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ANKRD27Q96NW4 1050 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 CGREF1Q99674 301 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 WFDC6Q9BQY6 131 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 TACO1Q9BSH4 297 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 TMEM38AQ9H6F2 299 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 CACYBPQ9HB71 228 aaKnown RBP10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 TRAPPC4Q9Y296 219 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 GPR52Q9Y2T5 361 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 VPS13CQ709C8 3753 aa10.32□□□□□ -0.76
RABGGTA-216ENST00000560243 ARID1AO14497 2285 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ZNF469Q96JG9 3925 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 LIPT2A6NK58 231 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 DNPH1O43598 174 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 GOSR1O95249 250 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ATE1O95260 518 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 SLC6A2P23975 617 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 FKBP2P26885 142 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 HTR2AP28223 471 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ADSLP30566 484 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 PRKAR1BP31321 381 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 IDUAP35475 653 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ARFIP2P53365 341 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 COPZ1P61923 177 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 SLC35A1P78382 337 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 DMTNQ08495 405 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 KLF10Q13118 480 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 CEACAM7Q14002 265 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 OR7A5Q15622 319 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ZSWIM7Q19AV6 140 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 SFRP5Q5T4F7 317 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 SPNS3Q6ZMD2 512 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 GALNT5Q7Z7M9 940 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ATG4DQ86TL0 474 aaPredicted RBP10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 TMEM99Q8N816 258 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 TSPEARQ8WU66 669 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 NINJ1Q92982 152 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 ZHX1-C8orf76Q96EF9 292 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 PIF1Q9H611 641 aa10.31□□□□□ -0.76
RABGGTA-216ENST00000560243 SAR1AQ9NR31 198 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms