RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 DNAJB13P59910 316 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 MERTKQ12866 999 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 LCP2Q13094 533 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 CBFBQ13951 182 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 HIKESHIQ53FT3 197 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 TSPO2Q5TGU0 170 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 SHQ1Q6PI26 577 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 UBASH3BQ8TF42 649 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 FAM120BQ96EK7 910 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 DNAJA3Q96EY1 480 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 SLC38A2Q96QD8 506 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 DOK1Q99704 481 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 THUMPD3Q9BV44 507 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 GATA5Q9BWX5 397 aaPredicted RBP11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 PIGUQ9H490 435 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 LPAR2Q9HBW0 351 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 ESM1Q9NQ30 184 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 UPB1Q9UBR1 384 aa11.1□□□□□ -0.63
RABGGTA-213ENST00000560127 CCDC151A5D8V7 595 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 hCG_2039718K7EN88 272 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 HMGN2P05204 90 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 MSMBP08118 114 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 TFPIP10646 304 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 UBL4AP11441 157 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 CPA3P15088 417 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 EFNA1P20827 205 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 MPGP29372 298 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ALDH3A1P30838 453 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 CCT5P48643 541 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 LASP1Q14847 261 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KIAA0040Q15053 153 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 IMPG1Q17R60 797 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KLHL24Q6TFL4 600 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 SLC22A9Q8IVM8 553 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 CNPY4Q8N129 248 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ZNF614Q8N883 585 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 TCP10LQ8TDR4 215 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 CHMP6Q96FZ7 201 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ZNF764Q96H86 408 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 LRRC37BQ96QE4 947 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KCNS3Q9BQ31 491 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KATNB1Q9BVA0 655 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 SERINC1Q9NRX5 453 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 SIRT3Q9NTG7 399 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 FLVCR1Q9Y5Y0 555 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KCNE3Q9Y6H6 103 aa11.09□□□□□ -0.63
RABGGTA-213ENST00000560127 KMT2CQ8NEZ4 4911 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 TMEM129A0AVI4 362 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 AKAP10O43572 662 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 TBX19O60806 448 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 RSL1D1O76021 490 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 PMS2P2O95744 297 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 AVPP01185 164 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CRYAAP02489 173 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 ERCC1P07992 297 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 DDX5P17844 614 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CDH2P19022 906 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CALCRP30988 508 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 SLC1A3P43003 542 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 H3F3AP84243 136 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 NAAAQ02083 359 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 SKP2Q13309 424 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 DCST2Q5T1A1 773 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 LSRQ86X29 649 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CARM1Q86X55 608 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 CCNYL1Q8N7R7 359 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 ZDHHC22Q8N966 263 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 MRPL24Q96A35 216 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 PPCDCQ96CD2 204 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 BOD1Q96IK1 185 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 LAT2Q9GZY6 243 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 REEP4Q9H6H4 257 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 MID1IP1Q9NPA3 183 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 ZCCHC3Q9NUD5 404 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 ACER3Q9NUN7 267 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 STK38LQ9Y2H1 464 aa11.08□□□□□ -0.64
RABGGTA-213ENST00000560127 PTGDR2Q9Y5Y4 395 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms