RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ZNF730Q6ZMV8 503 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-204ENST00000559931 NKAIN4Q8IVV8 208 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 PAPD5Q8NDF8 572 aaKnown RBP12.92□□□□□ -0.34
SMAD6-204ENST00000559931 PIK3C3Q8NEB9 887 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 OR2T29Q8NH02 315 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 HS6ST2Q96MM7 605 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 REEP1Q9H902 201 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 TMCC3Q9ULS5 477 aa12.92□□□□□ -0.34
SMAD6-204ENST00000559931 A0A1W2PNR3 127 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 H0YC42 278 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 SULT2B1O00204 365 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TNFRSF11BO00300 401 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 KPNA4O00629 521 aaPredicted RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 PRRG2O14669 202 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TNFSF11O14788 317 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ADAMDEC1O15204 470 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 LYPD3O95274 346 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 AHSA1O95433 338 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 CPN1P15169 458 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ZNF708P17019 499 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 SHC1P29353 583 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 MAGEA2P43356 314 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 EIF1AXP47813 144 aaKnown RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 CLK1P49759 484 aaKnown RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 SUCLG1P53597 346 aaKnown RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TPD52P55327 224 aaPredicted RBP12.91□□□□□ -0.34
SMAD6-204ENST00000559931 CLDN15P56746 228 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 CLDN18P56856 261 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 CARD18P57730 90 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 OR2B6P58173 313 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TLE1Q04724 770 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 IQCCQ4KMZ1 466 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 C1orf140Q5VVS0 124 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ZFP1Q6P2D0 407 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ESPNLQ6ZVH7 1005 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ZNF605Q86T29 641 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 PM20D2Q8IYS1 436 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ST6GALNAC3Q8NDV1 305 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 STK35Q8TDR2 534 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM255BQ8WV15 326 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM239Q8WW34 195 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 OSTF1Q92882 214 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 SLC25A36Q96CQ1 311 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 EPYCQ99645 322 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 TIGARQ9NQ88 270 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 ARMC1Q9NVT9 282 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
SMAD6-204ENST00000559931 A0A0J9YW62 118 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 A0A1W2PRQ8 180 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 PYCARD-AS1I3L0S3 204 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 CLOCKO15516 846 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 DEAF1O75398 565 aaPredicted RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 E2F6O75461 281 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 PRSS23O95084 383 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 FCGR1AP12314 374 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 FASP25445 335 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 IDUAP35475 653 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 RBM34P42696 430 aaKnown RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 RPS5P46782 204 aaKnown RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 CASP6P55212 293 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 MYBPHQ13203 477 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 DGCR6Q14129 220 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 SF3B4Q15427 424 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■□□□ 13.4
SMAD6-204ENST00000559931 C1QL3Q5VWW1 255 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 PODNL1Q6PEZ8 512 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 C5orf46Q6UWT4 87 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 LINC00114Q6XXX2 140 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 WDR88Q6ZMY6 472 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 OR2V1Q8NHB1 315 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 FAM57AQ8TBR7 257 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 DUS3LQ96G46 650 aaKnown RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 ARL5BQ96KC2 179 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 ALPK1Q96QP1 1244 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 TMEM43Q9BTV4 400 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 TAPBPLQ9BX59 468 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 KLHL4Q9C0H6 718 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 ANKRD19PQ9H560 264 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 DNAJB9Q9UBS3 223 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
SMAD6-204ENST00000559931 U3KQV3 271 aa12.9□□□□□ -0.34
SMAD6-204ENST00000559931 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.35
SMAD6-204ENST00000559931 TRAV36DV7A0A075B6V5 113 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 TRBV4-1A0A0J9YWV2 114 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 AHRRA9YTQ3 701 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 CXCL13O43927 109 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 SLC19A2O60779 497 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 SYNGR4O95473 234 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 BAG2O95816 211 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 LDLRP01130 860 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms