RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SLCO1B7G3V0H7 640 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 KLF11O14901 512 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 RAD51DO75771 328 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 COX5AP20674 150 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 DSTNP60981 165 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 CSNK2A1P68400 391 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-205ENST00000559898 H3F3AP84243 136 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 SPOCK1Q08629 439 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 P2RY6Q15077 328 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 GSTA3Q16772 222 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 C9orf135Q5VTT2 229 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF100Q8IYN0 542 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 OR52P1PQ8NH57 321 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 OIT3Q8WWZ8 545 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 HSD17B8Q92506 261 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 COX4I2Q96KJ9 171 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 TACO1Q9BSH4 297 aaKnown RBP15.64■□□□□ 0.09
HDDC3-205ENST00000559898 HDHD5Q9BXW7 423 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 GSX2Q9BZM3 304 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 ADAM19Q9H013 955 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 SLC25A37Q9NYZ2 338 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF443Q9Y2A4 671 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-205ENST00000559898 NOSIPQ9Y314 301 aaKnown RBP15.64■□□□□ 0.09
HDDC3-205ENST00000559898 RNF115Q9Y4L5 304 aa15.64■□□□□ 0.09
HDDC3-205ENST00000559898 CDHR4A6H8M9 788 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 CFAP73A6NFT4 308 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 KRT75O95678 551 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 DBIP07108 87 aaKnown RBP15.63■□□□□ 0.09
HDDC3-205ENST00000559898 ITGA5P08648 1049 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 DANCRP0C864 163 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 ZCCHC18P0CG32 403 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 CDKN1AP38936 164 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 IDH3AP50213 366 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 POLR2HP52434 150 aaKnown RBP15.63■□□□□ 0.09
HDDC3-205ENST00000559898 PGGHGQ32M88 737 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 C6orf10Q5SRN2 563 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 AGBL2Q5U5Z8 902 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 CLEC9AQ6UXN8 241 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 SERPINA11Q86U17 422 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 BIVMQ86UB2 503 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 CMIPQ8IY22 773 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 UBE2J2Q8N2K1 259 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 POTEKPQ9BYX7 375 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 FANCFQ9NPI8 374 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 SLC52A3Q9NQ40 469 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 TMEM181Q9P2C4 612 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 P2RX2Q9UBL9 471 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 HDGFL3Q9Y3E1 203 aa15.63■□□□□ 0.09
HDDC3-205ENST00000559898 MAGED1Q9Y5V3 778 aaPredicted RBP15.63■□□□□ 0.09
HDDC3-205ENST00000559898 FN1P02751 2386 aaKnown RBP15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ANK3Q12955 4377 aaKnown RBP15.62■□□□□ 0.09
HDDC3-205ENST00000559898 SHISA9B4DS77 424 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ARHGEF9O43307 516 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 NDUFS7O75251 213 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ERLIN1O75477 346 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 AKR7A3O95154 331 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 PGM3O95394 542 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ANP32DO95626 131 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 CD3EP07766 207 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 SLC1A3P43003 542 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 SLC16A1P53985 500 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 SLC25A3Q00325 362 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 LGALS3BPQ08380 585 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 FAPQ12884 760 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 CEACAM7Q14002 265 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 PDK3Q15120 406 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 PPA1Q15181 289 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 PAGE3Q5JUK9 113 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 FBXW9Q5XUX1 488 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 MIER2Q8N344 545 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 CADM2Q8N3J6 435 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 TMEM99Q8N816 258 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ZIC4Q8N9L1 334 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 MAPK1IP1LQ8NDC0 245 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 OR52N5Q8NH56 324 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 TMEM171Q8WVE6 324 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ITCHQ96J02 903 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 C1QTNF6Q9BXI9 259 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 TRIM2Q9C040 744 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 IKZF5Q9H5V7 419 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF701Q9NV72 531 aaPredicted RBP15.62■□□□□ 0.09
HDDC3-205ENST00000559898 FLVCR1Q9Y5Y0 555 aa15.62■□□□□ 0.09
HDDC3-205ENST00000559898 SPIN1Q9Y657 262 aaPredicted RBP15.62■□□□□ 0.09
HDDC3-205ENST00000559898 FAM234BA2RU67 622 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 FAAHO00519 579 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 CNOT4O95628 575 aaKnown RBP15.61■□□□□ 0.09
HDDC3-205ENST00000559898 CD8AP01732 235 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 P2RY4P51582 365 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 RGNQ15493 299 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 OR7A5Q15622 319 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF672Q499Z4 452 aaPredicted RBP15.61■□□□□ 0.09
HDDC3-205ENST00000559898 PEX5LQ8IYB4 626 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 PIGXQ8TBF5 258 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 APH1AQ96BI3 265 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 ZNF385AQ96PM9 386 aaKnown RBP15.61■□□□□ 0.09
HDDC3-205ENST00000559898 PRR14Q9BWN1 585 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 SLC7A10Q9NS82 523 aa15.61■□□□□ 0.09
HDDC3-205ENST00000559898 CR1P17927 2039 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms