RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 UBL7Q96S82 380 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 NMNAT3Q96T66 252 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ORAI3Q9BRQ5 295 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MARVELD1Q9BSK0 173 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SEMA6CQ9H3T2 930 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 RPS6KB2Q9UBS0 482 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FBXL21Q9UKT6 434 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 POMT2Q9UKY4 750 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ZNF346Q9UL40 294 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ERVK-19Q9WJR5 959 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 HS3ST3A1Q9Y663 406 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 KIR2DS5A0A0G2JLQ3 304 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 A0A0G2JNG1 304 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FAM221BA6H8Z2 402 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 KIR2DS3K7RE56 304 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 FZD7O75084 574 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 CTSEP14091 401 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ATF1P18846 271 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 NPR2P20594 1047 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 RPL4P36578 427 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MAGEB1P43366 347 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 PITPNBP48739 271 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 GDI2P50395 445 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 NRG3P56975 720 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SNRPD2P62316 118 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 KIR2DS5Q14953 304 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 MANEAQ5SRI9 462 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 LINC00114Q6XXX2 140 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SLC35F2Q8IXU6 374 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 TOE1Q96GM8 510 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 RBM18Q96H35 190 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 GPR174Q9BXC1 333 aa9.22□□□□□ -0.93
LRRC28-216ENST00000559819 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 AK6Q9Y3D8 172 aaKnown RBP9.22□□□□□ -0.93
LRRC28-216ENST00000559819 SPTBP11277 2137 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 TRAV6A0A075B6T7 132 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 A0A087WV48 116 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 PRAMEF26H0Y7S4 382 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ORC5O43913 435 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 CPNE3O75131 537 aaKnown RBP9.21□□□□□ -0.93
LRRC28-216ENST00000559819 SLC43A1O75387 559 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 SOX30O94993 753 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 NDUFB2O95178 105 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 CD3GP09693 182 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 RAB3BP20337 219 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 RBMS1P29558 406 aaKnown RBP9.21□□□□□ -0.93
LRRC28-216ENST00000559819 BTCP35070 178 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 RBM34P42696 430 aaKnown RBP9.21□□□□□ -0.93
LRRC28-216ENST00000559819 TAS2R43P59537 309 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ERVK-25P63136 954 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ULK3Q6PHR2 472 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 Q6ZS52 159 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 KRT74Q7RTS7 529 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 PARGQ86W56 976 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 IZUMO1Q8IYV9 350 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 LSMEM1Q8N8F7 131 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 THAP4Q8WY91 577 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 HSD17B8Q92506 261 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 OR14A2Q96R54 314 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.93
LRRC28-216ENST00000559819 MAP3K3Q99759 626 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 PDCD1LG2Q9BQ51 273 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ABCG5Q9H222 651 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 PRTFDC1Q9NRG1 225 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ACOXLQ9NUZ1 547 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 HAO2Q9NYQ3 351 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 SERTAD3Q9UJW9 196 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 GNG8Q9UK08 70 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 ICAM5Q9UMF0 924 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 BAIAP2Q9UQB8 552 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 MRPS7Q9Y2R9 242 aaKnown RBP9.21□□□□□ -0.93
LRRC28-216ENST00000559819 CLDN16Q9Y5I7 305 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 MAU2Q9Y6X3 613 aa9.21□□□□□ -0.93
LRRC28-216ENST00000559819 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 OIP5O43482 229 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 AKR7A2O43488 359 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 CSTAP01040 98 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 CT45A8P0DMV1 189 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 CT45A9P0DMV2 189 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 AHCYP23526 432 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 SLC6A1P30531 599 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 RRAS2P62070 204 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-216ENST00000559819 ACTC1P68032 377 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 ACTA1P68133 377 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 CDK5R1Q15078 307 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 ZNF141Q15928 474 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 YIF1BQ5BJH7 314 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 CT45A2Q5DJT8 189 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 BCL2L15Q5TBC7 163 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 PRR23CQ6ZRP0 262 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-216ENST00000559819 BCORP1Q8N888 145 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 MOSPD2Q8NHP6 518 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 C16orf52Q8NHV5 167 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 DGAT2Q96PD7 388 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 MKKSQ9NPJ1 570 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-216ENST00000559819 C2orf42Q9NWW7 574 aa9.21□□□□□ -0.94
LRRC28-216ENST00000559819 MSRAQ9UJ68 235 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms