RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 NID1P14543 1247 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
RPL28-206ENST00000558752 MERTKQ12866 999 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 LARS2Q15031 903 aaKnown RBP13.57□□□□□ -0.24
RPL28-206ENST00000558752 NDUFAF6Q330K2 333 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 LRIF1Q5T3J3 769 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 SSX8Q7RTT4 187 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 GRINAQ7Z429 371 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
RPL28-206ENST00000558752 SLC38A5Q8WUX1 472 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 HSD17B8Q92506 261 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 TMEM185BQ9H7F4 350 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 SLC6A13Q9NSD5 602 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 CLEC4AQ9UMR7 237 aa13.57□□□□□ -0.24
RPL28-206ENST00000558752 CHD3Q12873 2000 aaKnown RBP13.57□□□□□ -0.24
RPL28-206ENST00000558752 CENPVL1A0A0U1RR11 272 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 A0A1W2PP18 115 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 THBS1P07996 1170 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 ETFAP13804 333 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 IL32P24001 234 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
RPL28-206ENST00000558752 CSNK2A1P68400 391 aaPredicted RBP13.56□□□□□ -0.24
RPL28-206ENST00000558752 RGNQ15493 299 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 ZNF239Q16600 458 aaKnown RBP13.56□□□□□ -0.24
RPL28-206ENST00000558752 LIN52Q52LA3 116 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 AGKQ53H12 422 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 HMBOX1Q6NT76 420 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 TMPPEQ6ZT21 453 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 SLC35B4Q969S0 331 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 REG4Q9BYZ8 158 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 BCL2L10Q9HD36 194 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 FAIMQ9NVQ4 179 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 HDGFL3Q9Y3E1 203 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 ATRQ13535 2644 aa13.56□□□□□ -0.24
RPL28-206ENST00000558752 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 EVPLLA8MZ36 301 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 RNF223E7ERA6 249 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 CLOCKO15516 846 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 DNPH1O43598 174 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 PLAUP00749 431 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 C1QCP02747 245 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 YES1P07947 543 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 NCF2P19878 526 aaPredicted RBP13.55□□□□□ -0.24
RPL28-206ENST00000558752 SLC1A3P43003 542 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 HSP90B2PQ58FF3 399 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 ALKBH2Q6NS38 261 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 SLC2A7Q6PXP3 512 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 FCRLAQ7L513 359 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 RNF128Q8TEB7 428 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 CNOT9Q92600 299 aaKnown RBP13.55□□□□□ -0.24
RPL28-206ENST00000558752 CCDC106Q9BWC9 280 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 ALG2Q9H553 416 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 BARX1Q9HBU1 254 aaPredicted RBP13.55□□□□□ -0.24
RPL28-206ENST00000558752 A4GALTQ9NPC4 353 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 KLHL9Q9P2J3 617 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 CHRNA9Q9UGM1 479 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 TRAPPC4Q9Y296 219 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 DSPPQ9NZW4 1301 aa13.55□□□□□ -0.24
RPL28-206ENST00000558752 CDHR4A6H8M9 788 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 RNF212BA8MTL3 300 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ZNF208O43345 1280 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ATP8B1O43520 1251 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ENPP1P22413 925 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 SHC1P29353 583 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 AGTR1P30556 359 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 RYKP34925 604 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 IDH2P48735 452 aaKnown RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 POLR2HP52434 150 aaKnown RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 P2RY6Q15077 328 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 MAPK11Q15759 364 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 SYT14P1Q58G82 188 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 SMAP2Q8WU79 429 aaPredicted RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 TMEM158Q8WZ71 300 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ROBO4Q8WZ75 1007 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 S100PBPQ96BU1 408 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ZNF524Q96C55 264 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 ZHX1-C8orf76Q96EF9 292 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 HS6ST2Q96MM7 605 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 OR5B2Q96R09 309 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 QRSL1Q9H0R6 528 aaKnown RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 C12orf49Q9H741 205 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 MED4Q9NPJ6 270 aa13.54□□□□□ -0.24
RPL28-206ENST00000558752 LEF1Q9UJU2 399 aaPredicted RBP13.54□□□□□ -0.24
RPL28-206ENST00000558752 CLDN24A6NM45 220 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 C5orf58C9J3I9 102 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 OVOL3O00110 214 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 SULT2B1O00204 365 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 NR5A2O00482 541 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 CD5LO43866 347 aa13.53□□□□□ -0.24
RPL28-206ENST00000558752 PMS2P2O95744 297 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms