RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ALG10BQ5I7T1 473 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 NET1Q7Z628 596 aaPredicted RBP8.03□□□□□ -1.12
SPG11-207ENST00000558138 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 ADGRG3Q86Y34 549 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 TREML1Q86YW5 311 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 TUSC5Q8IXB3 177 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 ZNF100Q8IYN0 542 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 C10orf53Q8N6V4 93 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 CCDC197Q8NCU1 140 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 OR6K3Q8NGY3 331 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 PIGXQ8TBF5 258 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 RNF128Q8TEB7 428 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 LZICQ8WZA0 190 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 FAM162AQ96A26 154 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 SLC25A36Q96CQ1 311 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 TPD52L3Q96J77 140 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 ARL5BQ96KC2 179 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 CCT8L2Q96SF2 557 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 MCHR1Q99705 422 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 HOPXQ9BPY8 73 aaPredicted RBP8.03□□□□□ -1.12
SPG11-207ENST00000558138 KCTD14Q9BQ13 255 aaPredicted RBP8.03□□□□□ -1.12
SPG11-207ENST00000558138 TACO1Q9BSH4 297 aaKnown RBP8.03□□□□□ -1.12
SPG11-207ENST00000558138 TRIM2Q9C040 744 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 KLHL4Q9C0H6 718 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 EVA1AQ9H8M9 152 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 NPDC1Q9NQX5 325 aaPredicted RBP8.03□□□□□ -1.12
SPG11-207ENST00000558138 ADPRHL2Q9NX46 363 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 GALNT8Q9NY28 637 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 TMEM181Q9P2C4 612 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 KLHL13Q9P2N7 655 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 BAG5Q9UL15 447 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 SLC9A8Q9Y2E8 581 aa8.03□□□□□ -1.12
SPG11-207ENST00000558138 USP9YO00507 2555 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 A0A1B0GWA3 101 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 A8MVM7 634 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 TPST1O60507 370 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 EIF1BO60739 113 aaKnown RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 TNFSF13O75888 250 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 MFN2O95140 757 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 PMS2P2O95744 297 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ZNF682O95780 498 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 FAM107AO95990 144 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 PNMTP11086 282 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 CD247P20963 164 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 PTNP21246 168 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 AGTR1P30556 359 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 SSTR2P30874 369 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 IFNA8P32881 189 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 KIR2DL2P43627 348 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 MAP2K6P52564 334 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 PSME3P61289 254 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 TLE4Q04727 773 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 LIPEQ05469 1076 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 TFF3Q07654 80 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 CEACAM7Q14002 265 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 OR1Q1Q15612 314 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 OTUD3Q5T2D3 398 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 AP1ARQ63HQ0 302 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ULK3Q6PHR2 472 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 DEF8Q6ZN54 512 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 GPAT4Q86UL3 456 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 DMRTC2Q8IXT2 367 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 MICU2Q8IYU8 434 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 UBE2J2Q8N2K1 259 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ZNF610Q8N9Z0 462 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 DNAJA4Q8WW22 397 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 SLC38A4Q969I6 547 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 SLC35B4Q969S0 331 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 C3orf49Q96BT1 292 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 STARD4Q96DR4 205 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 SLC47A1Q96FL8 570 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 MED18Q9BUE0 208 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 MYLK2Q9H1R3 596 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ALG2Q9H553 416 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 SPAG4Q9NPE6 437 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 NDRG3Q9UGV2 375 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 TAGLN3Q9UI15 199 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 USP22Q9UPT9 525 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 NOSIPQ9Y314 301 aaKnown RBP8.02□□□□□ -1.13
SPG11-207ENST00000558138 SH3GLB1Q9Y371 365 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 MED12LQ86YW9 2145 aa8.02□□□□□ -1.13
SPG11-207ENST00000558138 ZC3H12DA2A288 527 aaKnown RBP8.01□□□□□ -1.13
SPG11-207ENST00000558138 SYT5O00445 386 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 SMAD9O15198 467 aaKnown RBP8.01□□□□□ -1.13
SPG11-207ENST00000558138 DNPH1O43598 174 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 CYTIPO60759 359 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 LGI1O95970 557 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 C8BP07358 591 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 YES1P07947 543 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 CD8BP10966 210 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 NQO1P15559 274 aaKnown RBP8.01□□□□□ -1.13
SPG11-207ENST00000558138 FPR1P21462 350 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 CBLP22681 906 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 IL32P24001 234 aa8.01□□□□□ -1.13
SPG11-207ENST00000558138 RPS5P46782 204 aaKnown RBP8.01□□□□□ -1.13
SPG11-207ENST00000558138 PCBP3P57721 371 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms