RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ZNF861PO60384 105 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ANP32DO95626 131 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TGM6O95932 706 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 AGTP01019 485 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 UGT2B4P06133 528 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PGK2P07205 417 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CLTAP09496 248 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ZCCHC18P0CG32 403 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CALCBP10092 127 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PTNP21246 168 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 NMT1P30419 496 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 RRM2P31350 389 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ATP5C1P36542 298 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 HNRNPFP52597 415 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 CLDN8P56748 225 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 GNB2P62879 340 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 IL18Q14116 193 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ANGPT1Q15389 498 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 MAPRE2Q15555 327 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PDK4Q16654 411 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PARP6Q2NL67 630 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ZNF699Q32M78 642 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 SLC36A3Q495N2 470 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ZNF311Q5JNZ3 666 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PHYHD1Q5SRE7 291 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 SLX4IPQ5VYV7 408 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PTRHD1Q6GMV3 140 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 ARSKQ6UWY0 536 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 DLEU7Q6UYE1 221 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA7Q7Z5G4 137 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 LRRC6Q86X45 466 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 NELFCDQ8IXH7 590 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 KATNAL2Q8IYT4 538 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ENTHD1Q8IYW4 607 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CSNK1A1LQ8N752 337 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TRPV1Q8NER1 839 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TMEM185AQ8NFB2 350 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 OR52B4Q8NGK2 314 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 OR10T2Q8NGX3 314 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 RAB3IL1Q8TBN0 382 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ZNF596Q8TC21 504 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 LKAAEAR1Q8TD35 194 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 OR1E3Q8WZA6 343 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 C12orf66Q96MD2 445 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 TRNT1Q96Q11 434 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 PANX1Q96RD7 426 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 ZNF184Q99676 751 aaPredicted RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 SH3GL3Q99963 347 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 KCNS3Q9BQ31 491 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 BPIFA3Q9BQP9 254 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 C11orf70Q9BRQ4 267 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CBWD1Q9BRT8 395 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 C9orf16Q9BUW7 83 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 SHCBP1LQ9BZQ2 653 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 MRM3Q9HC36 420 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 MEPEQ9NQ76 525 aaPredicted RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 DUS2Q9NX74 493 aaKnown RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 SLC39A1Q9NY26 324 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 UXTQ9UBK9 157 aaPredicted RBP2.24□□□□□ -2.05
SPG11-206ENST00000558093 KCNN3Q9UGI6 736 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CYTH4Q9UIA0 394 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PLA2G4CQ9UP65 541 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 CFL2Q9Y281 166 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 GTF3C1Q12789 2109 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 PTCH1Q13635 1447 aa2.24□□□□□ -2.05
SPG11-206ENST00000558093 IQANK1A0A1B0GTG1 560 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 TMEM89A2RUT3 159 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA8IPA6NC78 632 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 OR52A4PA6NMU1 304 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 DHRS7CA6NNS2 312 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 IQCF5A8MTL0 148 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA6L19H0YKK7 550 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 LSM1O15116 133 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 TRAPPC3O43617 180 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 DFNA5O60443 496 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 TBL1XO60907 577 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 SNNO75324 88 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 NDUFS6O75380 124 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 TRIM3O75382 744 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 GPX5O75715 221 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 STK17BO94768 372 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 RHOBTB1O94844 696 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 LCA5LO95447 670 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 HLA-DRAP01903 254 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 RETP07949 1114 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CYP11B1P15538 503 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 FUT3P21217 361 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MDKP21741 143 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 PRDX6P30041 224 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 LCN1P31025 176 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 GPR4P46093 362 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CAV2P51636 162 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MNAT1P51948 309 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 TSPAN5P62079 268 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 RPS6P62753 249 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 SKP1P63208 163 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 SLAQ13239 276 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 GPR176Q14439 515 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CASP8Q14790 479 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 HERPUD1Q15011 391 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms