RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 IGF2P01344 180 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 OPN1SWP03999 348 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 GPIP06744 558 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 PRG2P13727 222 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 IL11P20809 199 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 TCEA1P23193 301 aaKnown RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SFTPDP35247 375 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 DIO1P49895 249 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SLC35A1P78382 337 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ADORA2A-AS1P86434 159 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 BNIP1Q12981 228 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 PON3Q15166 354 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ELOA3BQ3SY89 546 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 MARVELD2Q8N4S9 558 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ELOA3Q8NG57 546 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 OR6T1Q8NGN1 323 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ITLN2Q8WWU7 325 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SMPDL3BQ92485 455 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 FAM162AQ96A26 154 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 ZNF524Q96C55 264 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 GMPPAQ96IJ6 420 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 NPAS1Q99742 590 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 BTBD10Q9BSF8 475 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 TMEM43Q9BTV4 400 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 RSPO3Q9BXY4 272 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-234ENST00000557703 PRRG4Q9BZD6 226 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 PIGMQ9H3S5 423 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 CHST11Q9NPF2 352 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
SHMT2-234ENST00000557703 COL12A1Q99715 3063 aa12.27□□□□□ -0.44
SHMT2-234ENST00000557703 TMEM229AB2RXF0 380 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 TNFSF11O14788 317 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 CXCL13O43927 109 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ZG16O60844 167 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 FZD7O75084 574 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 VAMP5O95183 116 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 OR5F1O95221 314 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 CLDN14O95500 239 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 IFNW1P05000 195 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 TFPIP10646 304 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ITGA2P17301 1181 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ENPP1P22413 925 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 TRAP1Q12931 704 aaKnown RBP12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF239Q16600 458 aaKnown RBP12.27□□□□□ -0.45
SHMT2-234ENST00000557703 IFI44LQ53G44 452 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 C3P1Q6ZMU1 363 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 SEM1Q6ZVN7 128 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 FKBP9P1Q75LS8 142 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 CARM1Q86X55 608 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 MCEMP1Q8IX19 187 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ADAMTS16Q8TE57 1224 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 SDCCAG3Q96C92 435 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 NSMCE2Q96MF7 247 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 HS6ST2Q96MM7 605 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-234ENST00000557703 TAPBPLQ9BX59 468 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 COQ10BQ9H8M1 238 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 FANCFQ9NPI8 374 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 KLHL9Q9P2J3 617 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 RNF6Q9Y252 685 aa12.27□□□□□ -0.45
SHMT2-234ENST00000557703 ICE1Q9Y2F5 2266 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 A0A0G2JNJ9 132 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 PYCARD-AS1I3L0S3 204 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 GPR171O14626 319 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 ZNHIT1O43257 154 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 FRS3O43559 492 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 PRKD3O94806 890 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TOXO94900 526 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 SERPINA1P01009 418 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TMIGD3P0DMS9 266 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-234ENST00000557703 HTR2AP28223 471 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 IDUAP35475 653 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 RBM34P42696 430 aaKnown RBP12.26□□□□□ -0.45
SHMT2-234ENST00000557703 H3F3AP84243 136 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 ST3GAL3Q11203 375 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 MYBPHQ13203 477 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 CEACAM7Q14002 265 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 FAM69AQ5T7M9 428 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 PAQR6Q6TCH4 344 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 LINC00114Q6XXX2 140 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 COMTD1Q86VU5 262 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 CYP4Z1Q86W10 505 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 FNDC9Q8TBE3 224 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 PIGXQ8TBF5 258 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 RNF128Q8TEB7 428 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 ASB9Q96DX5 294 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TPD52L3Q96J77 140 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 KLHL4Q9C0H6 718 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms