RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ERICH1Q86X53 443 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 ARL14Q8N4G2 192 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 GMCL1P1Q8NEA9 526 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 SLC22A8Q8TCC7 542 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 KIFAP3Q92845 792 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 C11orf24Q96F05 449 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 NDEL1Q9GZM8 345 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 CENPHQ9H3R5 247 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 TPK1Q9H3S4 243 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 AMBNQ9NP70 447 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 INIPQ9NRY2 104 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 FARSBQ9NSD9 589 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 C1orf123Q9NWV4 160 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 RHBDL2Q9NX52 303 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 DUS2Q9NX74 493 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 EURLQ9NYK6 297 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 HMGXB4Q9UGU5 601 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 ATP6V1HQ9UI12 483 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 C15orf41Q9Y2V0 281 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 ASB3Q9Y575 518 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 BDP1A6H8Y1 2624 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 GRIN2DO15399 1336 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 MYO5AQ9Y4I1 1855 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 MUC6Q6W4X9 2439 aa3.62□□□□□ -1.83
PRPF39-212ENST00000557477 BAZ2AQ9UIF9 1905 aaKnown RBP3.62□□□□□ -1.83
PRPF39-212ENST00000557477 PARP14Q460N5 1801 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 PRRC2BQ5JSZ5 2229 aaKnown RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TRAV6A0A075B6T7 132 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8IPA6NC78 632 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TRABD2BA6NFA1 517 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 NPIPA2E9PIF3 369 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8MH3BSY2 632 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 M0QZ92 97 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SDHDO14521 159 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CLDN3O15551 220 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TSC22D2O75157 780 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF253O75346 499 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SH3BGRLO75368 114 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SNX4O95219 450 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GSTT2P0CG29 244 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GSTT2BP0CG30 244 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CTRB1P17538 263 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CYLC1P35663 651 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ACAA2P42765 397 aaKnown RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CBX5P45973 191 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ETV1P50549 477 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 MAP3K7CLP57077 242 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TRA2BP62995 288 aaKnown RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SP4Q02446 784 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CRMP1Q14194 572 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ZIC1Q15915 447 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 KRTAP27-1Q3LI81 207 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 HSP90AA5PQ58FG0 334 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 CTRB2Q6GPI1 263 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 AFTPHQ6ULP2 937 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 KDELC1Q6UW63 502 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 LHFPL4Q7Z7J7 247 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GCNT2Q8N0V5 402 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SLC22A18ASQ8N1D0 253 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GIPC3Q8TF64 312 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF606Q8WXB4 792 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 ART4Q93070 314 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TOMM40LQ969M1 308 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 WBP1Q96G27 269 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 PIWIL1Q96J94 861 aaKnown RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 VSTM2LQ96N03 204 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 FICDQ9BVA6 458 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 TRIM9Q9C026 710 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 GBA3Q9H227 469 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 VPS37BQ9H9H4 285 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SLC40A1Q9NP59 571 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 C8orf4Q9NR00 106 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 KLRF1Q9NZS2 232 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 DDX19BQ9UMR2 479 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 DHRS7Q9Y394 339 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 FAM32AQ9Y421 112 aaKnown RBP3.61□□□□□ -1.83
PRPF39-212ENST00000557477 MFHAS1Q9Y4C4 1052 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 AP1M2Q9Y6Q5 423 aa3.61□□□□□ -1.83
PRPF39-212ENST00000557477 SIP14410 1827 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ZNFX1Q9P2E3 1918 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MCM3APO60318 1980 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TRAV9-2A0A087WT02 112 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SNTNA6NMZ2 147 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8KD6RF30 607 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 C11orf98E9PRG8 122 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 H3BQF6 201 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8TH3BQL2 631 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 HDAC3O15379 428 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RNF113AO15541 343 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MBTPS2O43462 519 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TYROBPO43914 113 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SHOX2O60902 331 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 OR4F21O95013 312 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms