RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MAGEA8P43361 318 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 POLR2HP52434 150 aaKnown RBP12.51□□□□□ -0.41
SNX6-210ENST00000557341 SLC16A1P53985 500 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
SNX6-210ENST00000557341 VEZF1Q14119 521 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 MRPL2Q5T653 305 aaKnown RBP12.51□□□□□ -0.41
SNX6-210ENST00000557341 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 DNAJC14Q6Y2X3 702 aaPredicted RBP12.51□□□□□ -0.41
SNX6-210ENST00000557341 ADGRG3Q86Y34 549 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
SNX6-210ENST00000557341 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 PMM1Q92871 262 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 TRIM2Q9C040 744 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 ALG2Q9H553 416 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 ASB6Q9NWX5 421 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 P2RX2Q9UBL9 471 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 MALT1Q9UDY8 824 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 TMED7Q9Y3B3 224 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
SNX6-210ENST00000557341 CIB4A0PJX0 185 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 ABCD4O14678 606 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
SNX6-210ENST00000557341 IL6P05231 212 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 CCNA2P20248 432 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 PCSK6P29122 969 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 CDKN1AP38936 164 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 MAP2K6P52564 334 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 CDH11P55287 796 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 OR2B6P58173 313 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 PPP2R2BQ00005 443 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 PDCD4Q53EL6 469 aaKnown RBP12.5□□□□□ -0.41
SNX6-210ENST00000557341 COX20Q5RI15 118 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 NXNQ6DKJ4 435 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 PEX5LQ8IYB4 626 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 MAELQ96JY0 434 aaKnown RBP12.5□□□□□ -0.41
SNX6-210ENST00000557341 MTHFD2LQ9H903 347 aaPredicted RBP12.5□□□□□ -0.41
SNX6-210ENST00000557341 FAIMQ9NVQ4 179 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
SNX6-210ENST00000557341 DSPPQ9NZW4 1301 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 TMEM72A0PK05 275 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 CFAP73A6NFT4 308 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 CCT8L1PA6NM43 557 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SHISA9B4DS77 424 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 EIF1BO60739 113 aaKnown RBP12.49□□□□□ -0.41
SNX6-210ENST00000557341 RAMP1O60894 148 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SLC22A3O75751 556 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 ANP32DO95626 131 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 TACR3P29371 465 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SLC1A3P43003 542 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SLC18A1P54219 525 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SLC35A1P78382 337 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 H3F3AP84243 136 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 FAPQ12884 760 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 EPS8Q12929 822 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 TNK1Q13470 666 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 LIN52Q52LA3 116 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 CCDC103Q8IW40 242 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 NAA11Q9BSU3 229 aaPredicted RBP12.49□□□□□ -0.41
SNX6-210ENST00000557341 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 CISD1Q9NZ45 108 aaKnown RBP12.49□□□□□ -0.41
SNX6-210ENST00000557341 CALML5Q9NZT1 146 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 SLC9A8Q9Y2E8 581 aa12.49□□□□□ -0.41
SNX6-210ENST00000557341 YLPM1P49750 1951 aaKnown RBP12.49□□□□□ -0.41
SNX6-210ENST00000557341 CDHR4A6H8M9 788 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 BCHEP06276 602 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 IMPDH2P12268 514 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 IDUAP35475 653 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 CRISP3P54108 245 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 GSTA3Q16772 222 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 OR7E24Q6IFN5 339 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 PAQR6Q6TCH4 344 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 KLHL17Q6TDP4 642 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 DTX2Q86UW9 622 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
SNX6-210ENST00000557341 OR52P1PQ8NH57 321 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
SNX6-210ENST00000557341 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 RMND5AQ9H871 391 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
SNX6-210ENST00000557341 SLC6A13Q9NSD5 602 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 ZIM2Q9NZV7 527 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 MGAT4BQ9UQ53 548 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 FLVCR1Q9Y5Y0 555 aa12.48□□□□□ -0.41
SNX6-210ENST00000557341 ZC3H12DA2A288 527 aaKnown RBP12.47□□□□□ -0.41
SNX6-210ENST00000557341 INAFM1C9JVW0 142 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 ITGA5P08648 1049 aa12.47□□□□□ -0.41
SNX6-210ENST00000557341 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms