RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 DEFB126Q9BYW3 111 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 REG4Q9BYZ8 158 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SLC26A1Q9H2B4 701 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 HOOK1Q9UJC3 728 aaKnown RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 FBXW2Q9UKT8 454 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 PYGO1Q9Y3Y4 419 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 FAM169AQ9Y6X4 670 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 MXRA5Q9NR99 2828 aa3.22□□□□□ -1.89
CHD8-212ENST00000557329 SONP18583 2426 aaKnown RBP3.22□□□□□ -1.89
CHD8-212ENST00000557329 UQCRHLA0A096LP55 91 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 SERINC4A6NH21 518 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 MSGN1A6NI15 193 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 H3BMH7 237 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 KCNK1O00180 336 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 STX7O15400 261 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 GPRIN2O60269 458 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ZFAND5O76080 213 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 IGHV2-70P01814 119 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 HLA-DQB2P05538 268 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 SAGP10523 405 aaPredicted RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 NR2F1P10589 423 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 MIPP30301 263 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 CDH5P33151 784 aaPredicted RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 MAGEA5P43359 124 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 RPL21P46778 160 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 GABRA4P48169 554 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TRPC1P48995 793 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TPD52P55327 224 aaPredicted RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 OR4D2P58180 307 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 RPL26P61254 145 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 SLC10A1Q14973 349 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 NSDHLQ15738 373 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 EXT1Q16394 746 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TYSND1Q2T9J0 566 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 SFT2D3Q587I9 215 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 GPR139Q6DWJ6 353 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 FRMPD2BQ6IN97 320 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 PRR27Q6MZM9 219 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 LRRC8BQ6P9F7 803 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TTC23LQ6PF05 361 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 Q6ZSR9 355 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ADCK2Q7Z695 626 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 SLC22A16Q86VW1 577 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TMEM139Q8IV31 216 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 FAM71AQ8IYT1 594 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 CDK20Q8IZL9 346 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 CYP4Z2PQ8N1L4 340 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ARHGAP24Q8N264 748 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 KIF2BQ8N4N8 673 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 RELL2Q8NC24 303 aaPredicted RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 MCOLN3Q8TDD5 553 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ROBO4Q8WZ75 1007 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ELMO1Q92556 727 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 RERGQ96A58 199 aaPredicted RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 IMMP1LQ96LU5 166 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 FAM111AQ96PZ2 611 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 VPS35Q96QK1 796 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 PEBP4Q96S96 227 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 LPAR4Q99677 370 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 NUDT16L1Q9BRJ7 211 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 PYGO2Q9BRQ0 406 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 MED18Q9BUE0 208 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ACAT2Q9BWD1 397 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 TRIM7Q9C029 511 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 THAP2Q9H0W7 228 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 ANKZF1Q9H8Y5 726 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 VPS37BQ9H9H4 285 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 LIN28AQ9H9Z2 209 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHD8-212ENST00000557329 C14orf105Q9NVL8 296 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 KLHL28Q9NXS3 571 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 RPL26L1Q9UNX3 145 aaKnown RBP3.21□□□□□ -1.9
CHD8-212ENST00000557329 FAM215AQ9Y5M1 114 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 LIPGQ9Y5X9 500 aa3.21□□□□□ -1.9
CHD8-212ENST00000557329 C15orf38-AP3S2A0A0A6YYH1 394 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 TRGV5A0A0B4J1U4 118 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 A0A1W2PPR1 153 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 PINLYPA6NC86 204 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 TCF21O43680 179 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 SRPX2O60687 465 aaPredicted RBP3.2□□□□□ -1.9
CHD8-212ENST00000557329 B4GALT2O60909 372 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 VPS26AO75436 327 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 TRAPPC6AO75865 159 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 GPIP06744 558 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 ATP1B2P14415 290 aaPredicted RBP3.2□□□□□ -1.9
CHD8-212ENST00000557329 GABRA1P14867 456 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 HNF1AP20823 631 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 PCGF2P35227 344 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 ACVR1BP36896 505 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 SRP14P37108 136 aaKnown RBP3.2□□□□□ -1.9
CHD8-212ENST00000557329 HLCSP50747 726 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 DCDC1P59894 354 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 POLR2FP61218 127 aaKnown RBP3.2□□□□□ -1.9
CHD8-212ENST00000557329 KCNJ2P63252 427 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 OGDHQ02218 1023 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 IHHQ14623 411 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 ABRAXAS2Q15018 415 aa3.2□□□□□ -1.9
CHD8-212ENST00000557329 SIX1Q15475 284 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms