RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 LRRC74BQ6ZQY2 392 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TMPPEQ6ZT21 453 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 MSANTD1Q6ZTZ1 278 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 SSX8Q7RTT4 187 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 GRINAQ7Z429 371 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 P3H2Q8IVL5 708 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TUSC5Q8IXB3 177 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 RNF128Q8TEB7 428 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ABHD3Q8WU67 409 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TLCD1Q96CP7 247 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 C1orf159Q96HA4 380 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TEX37Q96LM6 180 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 NPAS1Q99742 590 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ACTR6Q9GZN1 396 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 OR10A4Q9H209 315 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CXXC4Q9H2H0 198 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 RAD21L1Q9H4I0 556 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 EXOSC3Q9NQT5 275 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 SDR39U1Q9NRG7 319 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ACER3Q9NUN7 267 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 P2RX2Q9UBL9 471 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ABCA4P78363 2273 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CFAP73A6NFT4 308 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 OIP5O43482 229 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 NTN1O95631 604 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 PSMB1P20618 241 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 PGM1P36871 562 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 IDH2P48735 452 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 DIO1P49895 249 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 POLR2JP52435 117 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 LARS2Q15031 903 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 STAC2Q6ZMT1 411 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 FRRS1Q6ZNA5 592 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 PLEKHM3Q6ZWE6 761 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF550Q7Z398 422 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 GALNT5Q7Z7M9 940 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF440Q8IYI8 595 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF100Q8IYN0 542 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 PNPT1Q8TCS8 783 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 HSD17B8Q92506 261 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 DDIT4LQ96D03 193 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 MUCL1Q96DR8 90 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 MAELQ96JY0 434 aaKnown RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 SERHL2Q9H4I8 314 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TPT1P8Q9HAU6 139 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 TCF7L2Q9NQB0 619 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 BEX4Q9NWD9 120 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-222ENST00000556768 CHRNA9Q9UGM1 479 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 HDGFL3Q9Y3E1 203 aa6.53□□□□□ -1.36
SCFD1-222ENST00000556768 NF1P21359 2839 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 FAM234BA2RU67 622 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 AGAP5A6NIR3 686 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 C5orf58C9J3I9 102 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 C9JVG2 144 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 GPR171O14626 319 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 DNPH1O43598 174 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 EFNA2O43921 213 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SMPD2O60906 423 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 FESP07332 822 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 ZCCHC18P0CG32 403 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 NID1P14543 1247 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 KLK2P20151 261 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 CXCR1P25024 350 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 HOXC12P31275 282 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SLC1A3P43003 542 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 RIPPLY3P57055 190 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 IRX1P78414 480 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 ITGADQ13349 1161 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 CAPRIN1Q14444 709 aaKnown RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 MAPK14Q16539 360 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SYPL1Q16563 259 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 ACKR1Q16570 336 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 GFOD2Q3B7J2 385 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SLC9B1Q4ZJI4 515 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SLC35F1Q5T1Q4 408 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 MTDHQ86UE4 582 aaKnown RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 TGIF2LYQ8IUE0 185 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 UBE2J2Q8N2K1 259 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 WDR60Q8WVS4 1066 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 ATP6V1G3Q96LB4 118 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 C7orf26Q96N11 449 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 CCL19Q99731 98 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 INPP5KQ9BT40 448 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 QRSL1Q9H0R6 528 aaKnown RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 RABEP2Q9H5N1 569 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 ESRP2Q9H6T0 727 aaKnown RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 UBTD1Q9HAC8 227 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 BCO1Q9HAY6 547 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 PARPBPQ9NWS1 579 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 KCNE5Q9UJ90 142 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 IFT52Q9Y366 437 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 USH1CQ9Y6N9 552 aa6.52□□□□□ -1.37
SCFD1-222ENST00000556768 HRNRQ86YZ3 2850 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-222ENST00000556768 IGHV3-15A0A0B4J1V0 119 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms