RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 OGDHQ02218 1023 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SLC10A7Q0GE19 358 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 PLD1Q13393 1074 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 CUL1Q13616 776 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 RCN1Q15293 331 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 KLHL38Q2WGJ6 581 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 TIGITQ495A1 244 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 GLYR1Q49A26 553 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 TMEM52BQ4KMG9 183 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SLC22A6Q4U2R8 563 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 CTSL3PQ5NE16 218 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 PDZK1Q5T2W1 519 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 WSCD1Q658N2 575 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 OR5M10Q6IEU7 315 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC137Q6PK04 289 aaKnown RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 LRRC31Q6UY01 552 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SERINC5Q86VE9 423 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 FAM228AQ86W67 206 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 ITPRIPQ8IWB1 547 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 C9orf40Q8IXQ3 194 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 FGFRL1Q8N441 504 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SLC2A14Q8TDB8 520 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SCFD1Q8WVM8 642 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 PSMG2Q969U7 264 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 C10orf35Q96D05 121 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 RASD2Q96D21 266 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 ALS2CR12Q96Q35 445 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 TSC22D3Q99576 134 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 LZTS2Q9BRK4 669 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 ROPN1BQ9BZX4 212 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 TRIM4Q9C037 500 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SLITRK2Q9H156 845 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 RHBGQ9H310 441 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 GLIPR2Q9H4G4 154 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 NHEJ1Q9H9Q4 299 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 CAB39LQ9H9S4 337 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 GNB4Q9HAV0 340 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 ZNHIT6Q9NWK9 470 aaKnown RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 PAK1IP1Q9NWT1 392 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-210ENST00000556718 SIGLEC8Q9NYZ4 499 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF581Q9P0T4 197 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
PRPF39-210ENST00000556718 UHRF1BP1Q6BDS2 1440 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CASKIN1Q8WXD9 1431 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SMIM28A0A1B0GU29 152 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 A0A1W2PNU3 283 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 GOLGA8OA6NCC3 632 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 DHRS7CA6NNS2 312 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 FAM220BPB1ANY3 271 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 E9PBE3 544 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 GOLGA8NF8WBI6 632 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SULT2B1O00204 365 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 NBR2O15453 112 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 RGS16O15492 202 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF264O43296 627 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 PRKYO43930 277 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 OR10H3O60404 316 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SMIM24O75264 130 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 ZNF253O75346 499 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SCRG1O75711 98 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 UQCRFS1P1P0C7P4 283 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 TROVE2P10155 538 aaKnown RBP eCLIP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 NCK1P16333 377 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 IGHV1-2P23083 117 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CCNCP24863 283 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 HOXD10P28358 340 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 ADORA2BP29275 332 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 RANBP1P43487 201 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 RPL29P47914 159 aaKnown RBP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 DAP3P51398 398 aaKnown RBP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 PRKXP51817 358 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 BEX3Q00994 111 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CHRNB3Q05901 458 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 C1orf61Q13536 156 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 RUNX3Q13761 415 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 DPYSL3Q14195 570 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 TGIF1Q15583 401 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 WHAMMP3Q1A5X7 153 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 QRICH1Q2TAL8 776 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 OR2A2Q6IF42 318 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CCBE1Q6UXH8 406 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC121Q6ZUS5 278 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 NRMQ8IXM6 262 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 ARHGAP18Q8N392 663 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 BBS5Q8N3I7 341 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 POM121L12Q8N7R1 296 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CCDC148Q8NFR7 591 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 OR4D9Q8NGE8 314 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 OR52K2Q8NGK3 314 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 AGAP11Q8TF27 550 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 HTR3CQ8WXA8 447 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CXorf40BQ96DE9 158 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 IFT74Q96LB3 600 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 SLC38A2Q96QD8 506 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CYP2S1Q96SQ9 504 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CHRDL1Q9BU40 450 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 VCXQ9H320 206 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 VCX3BQ9H321 246 aa3.36□□□□□ -1.87
PRPF39-210ENST00000556718 CENPHQ9H3R5 247 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms