RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MAPK1P28482 360 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SERPINF1P36955 418 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
ACTN1-221ENST00000556571 GPR68Q15743 365 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 C9orf135Q5VTT2 229 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 KLHL24Q6TFL4 600 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 CASP12Q6UXS9 341 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SLC46A3Q7Z3Q1 461 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 CCDC103Q8IW40 242 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 C1orf159Q96HA4 380 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 ARL5BQ96KC2 179 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 PRPF18Q99633 342 aaKnown RBP10.38□□□□□ -0.75
ACTN1-221ENST00000556571 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-221ENST00000556571 CCDC106Q9BWC9 280 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 PLA2G12AQ9BZM1 189 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 BPESC1Q9GZL8 116 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 CTPS2Q9NRF8 586 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SLC7A10Q9NS82 523 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SLC17A7Q9P2U7 560 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 KCNE5Q9UJ90 142 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 TRAPPC4Q9Y296 219 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 SLC9A8Q9Y2E8 581 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 FIS1Q9Y3D6 152 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 DNAJC15Q9Y5T4 150 aa10.38□□□□□ -0.75
ACTN1-221ENST00000556571 NUP214P35658 2090 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-221ENST00000556571 B9A039 149 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 SPRY1O43609 319 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-221ENST00000556571 FCMRO60667 390 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 EIF1BO60739 113 aaKnown RBP10.37□□□□□ -0.75
ACTN1-221ENST00000556571 LYPLA1O75608 230 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-221ENST00000556571 UGT2B17O75795 530 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 ITGA2P17301 1181 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 MPGP29372 298 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 OR2B6P58173 313 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 H3F3AP84243 136 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 SLC25A3Q00325 362 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 PCLAFQ15004 111 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 KANK2Q63ZY3 851 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 GRINAQ7Z429 371 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 DDIASQ8IXT1 998 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 ANKS4BQ8N8V4 417 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 OR5D16Q8NGK9 328 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 ZNF563Q8TA94 476 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 HPS1Q92902 700 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 COQ8BQ96D53 544 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 PPP3R2Q96LZ3 170 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 ZIM3Q96PE6 472 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 OBP2BQ9NPH6 170 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 TMEM181Q9P2C4 612 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 TMEFF2Q9UIK5 374 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-221ENST00000556571 FBXO9Q9UK97 447 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-221ENST00000556571 MKLN1Q9UL63 735 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 FLVCR1Q9Y5Y0 555 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
ACTN1-221ENST00000556571 CENPVL1A0A0U1RR11 272 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 CFLARO15519 480 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 PDE5AO76074 875 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 FGF4P08620 206 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 MATN1P21941 496 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 PAX7P23759 505 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 GIFP27352 417 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 CFPP27918 469 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 ALDH3A1P30838 453 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 PGM1P36871 562 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 CHN2P52757 468 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 SLC35A1P78382 337 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 ZSWIM7Q19AV6 140 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 ARHGAP11BQ3KRB8 267 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 TSPO2Q5TGU0 170 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 SPATA19Q7Z5L4 167 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 ADGRG3Q86Y34 549 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 OR5AK3PQ8NH89 298 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 DNAJA3Q96EY1 480 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 BOD1Q96IK1 185 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 KCNS3Q9BQ31 491 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 NAA11Q9BSU3 229 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-221ENST00000556571 SOX7Q9BT81 388 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 GATA5Q9BWX5 397 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-221ENST00000556571 BHLHE41Q9C0J9 482 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-221ENST00000556571 OR11A1Q9GZK7 315 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 ZNF350Q9GZX5 532 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 RAB1BQ9H0U4 201 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 KCNK9Q9NPC2 374 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 CA10Q9NS85 328 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 SLC35A3Q9Y2D2 325 aa10.36□□□□□ -0.75
ACTN1-221ENST00000556571 A0A0A6YYJ9 748 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 LRP5LA4QPB2 252 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 SLCO1B7G3V0H7 640 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 KLF11O14901 512 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 PIP5K1BO14986 540 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 TM9SF1O15321 606 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 NPHS1O60500 1241 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 SNUPNO95149 360 aaKnown RBP10.35□□□□□ -0.75
ACTN1-221ENST00000556571 STAMBPO95630 424 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 CRYAAP02489 173 aa10.35□□□□□ -0.75
ACTN1-221ENST00000556571 GUSBP08236 651 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms