RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TOMM20Q15388 145 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 SF3B4Q15427 424 aaKnown RBP eCLIP10.15□□□□□ -0.78
FOXN3-212ENST00000556541 PDSS1Q5T2R2 415 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 FAM69AQ5T7M9 428 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 CD300LDQ6UXZ3 194 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 WDR88Q6ZMY6 472 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 HIPK1Q86Z02 1210 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ADPRHL1Q8NDY3 354 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 OR5K1Q8NHB7 308 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 MFSD8Q8NHS3 518 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ABTB1Q969K4 478 aaPredicted RBP10.15□□□□□ -0.78
FOXN3-212ENST00000556541 MIB2Q96AX9 1013 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.78
FOXN3-212ENST00000556541 KLHL15Q96M94 604 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ALPK1Q96QP1 1244 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 PRR14Q9BWN1 585 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 GABARAPL1Q9H0R8 117 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 SLC6A15Q9H2J7 730 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TMCC3Q9ULS5 477 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 MED31Q9Y3C7 131 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ZNF337Q9Y3M9 751 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 SAMHD1Q9Y3Z3 626 aaKnown RBP10.15□□□□□ -0.78
FOXN3-212ENST00000556541 TESMINQ9Y4I5 508 aa10.15□□□□□ -0.78
FOXN3-212ENST00000556541 ASH1LQ9NR48 2969 aaKnown RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CYSRT1A8MQ03 144 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 GNGT2O14610 69 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CASQ2O14958 399 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 KLF4O43474 513 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 DIRAS1O95057 198 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 AHSA1O95433 338 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 TSPAN19P0C672 248 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 POU3F2P20265 443 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 YAP1P46937 504 aaKnown RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 SLC9A3P48764 834 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 RAC3P60763 192 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CSNK2A1P68400 391 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 MICAQ29983 383 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CTU2Q2VPK5 515 aaKnown RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 C1orf140Q5VVS0 124 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 ZNF770Q6IQ21 691 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 HMBOX1Q6NT76 420 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 C1orf94Q6P1W5 598 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 PODNL1Q6PEZ8 512 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 Q6ZPB1 254 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 TMPPEQ6ZT21 453 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 TMPRSS11FQ6ZWK6 438 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 GGNQ86UU5 652 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 NKAIN4Q8IVV8 208 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CHERPQ8IWX8 916 aaKnown RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 LILRA2Q8N149 483 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 SLC43A2Q8N370 569 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 MEIOBQ8N635 442 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 SCAIQ8N9R8 606 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 ZPLD1Q8TCW7 415 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 LRTOMTQ8WZ04 291 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 NPAS1Q99742 590 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 PTDSS2Q9BVG9 487 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 DEFB127Q9H1M4 99 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 LDAHQ9H6V9 325 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 FKRPQ9H9S5 495 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 RNPEPL1Q9HAU8 725 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 FANCFQ9NPI8 374 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 SPRR3Q9UBC9 169 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 RPH3AQ9Y2J0 694 aaPredicted RBP10.14□□□□□ -0.79
FOXN3-212ENST00000556541 ZNF835Q9Y2P0 537 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 LIPGQ9Y5X9 500 aa10.14□□□□□ -0.79
FOXN3-212ENST00000556541 TRBV4-1A0A0J9YWV2 114 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 AHRRA9YTQ3 701 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 FTCDNL1E5RQL4 147 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 GMFGO60234 142 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 EIF1BO60739 113 aaKnown RBP10.13□□□□□ -0.79
FOXN3-212ENST00000556541 CCNB2O95067 398 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ADAP00813 363 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ANXA8P13928 327 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ANPEPP15144 967 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 FPR3P25089 353 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 IDUAP35475 653 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 OMPP47874 163 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 AGFG1P52594 562 aaKnown RBP10.13□□□□□ -0.79
FOXN3-212ENST00000556541 UGT2B15P54855 530 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 RPS3AP61247 264 aaKnown RBP10.13□□□□□ -0.79
FOXN3-212ENST00000556541 FOXK1P85037 733 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 COX10Q12887 443 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 RCN1Q15293 331 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ZNF74Q16587 644 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 EXOC3L2Q2M3D2 409 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 FGD3Q5JSP0 725 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ZNF730Q6ZMV8 503 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 RRM2BQ7LG56 351 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ADGRE4PQ86SQ3 457 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ZDHHC13Q8IUH4 622 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 CISD2Q8N5K1 135 aaKnown RBP10.13□□□□□ -0.79
FOXN3-212ENST00000556541 ST6GALNAC3Q8NDV1 305 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 OR4K5Q8NGD3 323 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 OR2V1Q8NHB1 315 aa10.13□□□□□ -0.79
FOXN3-212ENST00000556541 PIGXQ8TBF5 258 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms