RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TRAPPC4Q9Y296 219 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 AP3D1O14617 1153 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 ZNF208O43345 1280 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 RAD51DO75771 328 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 LY6G6DO95868 133 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 PAX1P15863 534 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 CXCR1P25024 350 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 STX1BP61266 288 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 FAPQ12884 760 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
SNX6-205ENST00000555648 ZNF672Q499Z4 452 aaPredicted RBP13.64□□□□□ -0.23
SNX6-205ENST00000555648 KLHL17Q6TDP4 642 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 MIER2Q8N344 545 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 CIARTQ8N365 385 aaPredicted RBP13.64□□□□□ -0.23
SNX6-205ENST00000555648 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 OSGIN1Q9UJX0 560 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
SNX6-205ENST00000555648 SETD2Q9BYW2 2564 aaPredicted RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 TMEM72A0PK05 275 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 DPRXA6NFQ7 191 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 OR5H1A6NKK0 313 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 FAAHO00519 579 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 C1QCP02747 245 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 BCHEP06276 602 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 NCF2P19878 526 aaPredicted RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 COX5AP20674 150 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 POLR2JP52435 117 aaKnown RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 DSTNP60981 165 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 EPS8Q12929 822 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 VEZF1Q14119 521 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 ZSWIM7Q19AV6 140 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 SLC9B1Q4ZJI4 515 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 TMEM108Q6UXF1 575 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 CCDC103Q8IW40 242 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 CADM2Q8N3J6 435 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 ZNF433Q8N7K0 673 aaPredicted RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 TAPBPLQ9BX59 468 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 RAD21L1Q9H4I0 556 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 TPT1P8Q9HAU6 139 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 TMBIM4Q9HC24 238 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 CISD1Q9NZ45 108 aaKnown RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 MGAT4BQ9UQ53 548 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 SLC9A8Q9Y2E8 581 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 NUP214P35658 2090 aaPredicted RBP13.63□□□□□ -0.23
SNX6-205ENST00000555648 ACANP16112 2415 aa13.63□□□□□ -0.23
SNX6-205ENST00000555648 ZNF716A6NP11 495 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 GPIP06744 558 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 ETFAP13804 333 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 RPS4Y1P22090 263 aaKnown RBP13.62□□□□□ -0.23
SNX6-205ENST00000555648 EDNRAP25101 427 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 IDUAP35475 653 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 SLC16A1P53985 500 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 CDH11P55287 796 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 TGFBR3Q03167 851 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 ETFDHQ16134 617 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 WBP2NLQ6ICG8 309 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 OR7E24Q6IFN5 339 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 NEUROG1Q92886 237 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 MAELQ96JY0 434 aaKnown RBP13.62□□□□□ -0.23
SNX6-205ENST00000555648 HS6ST2Q96MM7 605 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 SDR39U1Q9NRG7 319 aaPredicted RBP13.62□□□□□ -0.23
SNX6-205ENST00000555648 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 PRDM4Q9UKN5 801 aa13.62□□□□□ -0.23
SNX6-205ENST00000555648 FAM234BA2RU67 622 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ABCD4O14678 606 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ADAM11O75078 769 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 KRT33AO76009 404 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 PGM3O95394 542 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 SOD3P08294 240 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ZNF83P51522 516 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 OR7A5Q15622 319 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 CLEC12BQ2HXU8 276 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 OTUD3Q5T2D3 398 aaPredicted RBP13.61□□□□□ -0.23
SNX6-205ENST00000555648 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ZNF836Q6ZNA1 936 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ATG4DQ86TL0 474 aaPredicted RBP13.61□□□□□ -0.23
SNX6-205ENST00000555648 LILRB1Q8NHL6 650 aaPredicted RBP13.61□□□□□ -0.23
SNX6-205ENST00000555648 SLC38A5Q8WUX1 472 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 VPS33AQ96AX1 596 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 TLCD1Q96CP7 247 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 OR52B2Q96RD2 323 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 TRIM2Q9C040 744 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
SNX6-205ENST00000555648 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
SNX6-205ENST00000555648 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
SNX6-205ENST00000555648 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms